TFE3 (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000012287 T037427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY

RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.914 1.000
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.914 1.000
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.914 1.000
TFE3
M09790_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.914 1.000
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB

VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.914 1.000
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN

NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.871 0.981
Tfe3
M05833_2.00
Mus musculus
CACGTGAY

RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.871 0.981
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.871 0.981
Tfe3
M09884_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.871 0.981
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN

NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.871 0.963
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN

NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.871 0.963
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH

DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.871 0.963
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY

RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.871 0.963
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB

VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.871 0.963
MITF
M09880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.871 0.963
MITF
M09881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.871 0.963
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000013076 bHLH 347 400
ENSSSCP00000030065 bHLH 312 365

Links

Other bHLH family TFs
Other Sus scrofa TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000012088 Ailuropoda melanoleuca ENSAMEG00000012088 N 0.000
Alligator_sinensis_CCG006007.1 Alligator sinensis Alligator_sinensis_CCG006007.1 N 0.000
Aqu1.222503 Amphimedon queenslandica Aqu1.222503 N 0.000
ENSAPLG00000007715 Anas platyrhynchos ENSAPLG00000007715 N 0.000
KDM5B Anolis carolinensis ENSACAG00000005107 N 0.000
AALB003225 Anopheles albimanus AALB003225 N 0.000
AARA006109 Anopheles arabiensis AARA006109 N 0.000
AATE009040 Anopheles atroparvus AATE009040 N 0.000
ACHR007377 Anopheles christyi ACHR007377 N 0.000
ACOM038290 Anopheles coluzzii ACOM038290 N 0.000
ACUA025224 Anopheles culicifacies ACUA025224 N 0.000
ADAC004659 Anopheles darlingi ADAC004659 N 0.000
ADIR009258 Anopheles dirus ADIR009258 N 0.000
AEPI000432 Anopheles epiroticus AEPI000432 N 0.000
AFAF009884 Anopheles farauti AFAF009884 N 0.000
AFUN008496 Anopheles funestus AFUN008496 N 0.000
AGAP004854 Anopheles gambiae AGAP004854 N 0.000
AMAM014474 Anopheles maculatus AMAM014474 N 0.000
AMEC004492 Anopheles melas AMEC004492 N 0.000
AMEM014063 Anopheles merus AMEM014063 N 0.000
AMIN011637 Anopheles minimus AMIN011637 N 0.000
AQUA000338 Anopheles quadriannulatus AQUA000338 N 0.000
ASTEI05939 Anopheles stephensi ASTEI05939 N 0.000
GB52426 Apis mellifera GB52426 N 0.000
Afo_R005441 Aptenodytes forsteri Afo_R005441 N 0.000
ENSAMXG00000018648 Astyanax mexicanus ENSAMXG00000018648 N 0.000
ENSAMXG00000024732 Astyanax mexicanus ENSAMXG00000024732 N 0.000
ACEP21606 Atta cephalotes ACEP21606 N 0.000
BGIBMGA004558 Bombyx mori BGIBMGA004558 N 0.000
ENSP00000356233-D1 Bos grunniens ENSP00000356233-D1 N 0.000
KDM5B Bos taurus ENSBTAG00000006175 N 0.000
Brh_R004837 Buceros rhinoceros Brh_R004837 N 0.000
KDM5B Callithrix jacchus ENSCJAG00000006050 N 0.000
Aan_R003738 Calypte anna Aan_R003738 N 0.000
Cflo_12071--XP_001122635.1_APIME Camponotus floridanus Cflo_12071--XP_001122635.1_APIME N 0.000
KDM5B Canis familiaris ENSCAFG00000010452 N 0.000
CapteG147496 Capitella teleta CapteG147496 N 0.000
KDM5B Cavia porcellus ENSCPOG00000010644 N 0.000
Cmyd_10020716 Chelonia mydas Cmyd_10020716 N 0.000
ENSCSAG00000014155 Chlorocebus sabaeus ENSCSAG00000014155 N 0.000
KDM5B Choloepus hoffmanni ENSCHOG00000012197 N 0.000
CLEC007177 Cimex lectularius CLEC007177 N 0.000
CGI_10007771 Crassostrea gigas CGI_10007771 N 0.000
KGM_20601 Danaus plexippus KGM_20601 N 0.000
kdm5bb Danio rerio ENSDARG00000003098 N 0.000
kdm5ba Danio rerio ENSDARG00000057093 N 0.000
KDM5B Dasypus novemcinctus ENSDNOG00000003205 N 0.000
GF14289 Drosophila ananassae FBgn0091316 N 0.000
GG24264 Drosophila erecta FBgn0116396 N 0.000
GH10714 Drosophila grimshawi FBgn0118195 N 0.000
lid Drosophila melanogaster FBgn0031759 N 0.000
GI11300 Drosophila mojavensis FBgn0134061 N 0.000
GL19092 Drosophila persimilis FBgn0156692 N 0.000
GA25342 Drosophila pseudoobscura FBgn0246723 N 0.000
GM17977 Drosophila sechellia FBgn0172884 N 0.000
GD22615 Drosophila simulans FBgn0194016 N 0.000
GK15405 Drosophila willistoni FBgn0217410 N 0.000
GE18962 Drosophila yakuba FBgn0236332 N 0.000
ECANG7_00151 Echinococcus canadensis ECANG7_00151 N 0.000
KDM5B Echinops telfairi ENSETEG00000018113 N 0.000
KDM5B Equus caballus ENSECAG00000014268 N 0.000
KDM5B Felis catus ENSFCAG00000013102 N 0.000
ENSFALG00000002622 Ficedula albicollis ENSFALG00000002622 N 0.000
ENSGMOG00000001476 Gadus morhua ENSGMOG00000001476 N 0.000
ENSGMOG00000019547 Gadus morhua ENSGMOG00000019547 N 0.000
ENSGMOG00000019538 Gadus morhua ENSGMOG00000019538 N 0.000
ENSGALG00000000427 Gallus gallus ENSGALG00000000427 N 0.000
kdm5ba Gasterosteus aculeatus ENSGACG00000000508 N 0.000
kdm5bb Gasterosteus aculeatus ENSGACG00000011868 N 0.000
KDM5B Gorilla gorilla ENSGGOG00000003073 N 0.000
HMEL015554 Heliconius melpomene HMEL015554 N 0.000
KDM5B Homo sapiens ENSG00000117139 N 0.000
HDID_0000434601 Hymenolepis diminuta HDID_0000434601 N 0.000
ENSSTOG00000000372 Ictidomys tridecemlineatus ENSSTOG00000000372 N 0.000
ENSLACG00000012136 Latimeria chalumnae ENSLACG00000012136 N 0.000
ENSLOCG00000010123 Lepisosteus oculatus ENSLOCG00000010123 N 0.000
LotgiG205701 Lottia gigantea LotgiG205701 N 0.000
KDM5B Loxodonta africana ENSLAFG00000005104 N 0.000
LCUP008086 Lucilia cuprina LCUP008086 N 0.000
LLOJ009523 Lutzomyia longipalpis LLOJ009523 N 0.000
ENSP00000356233 Macaca fascicularis ENSP00000356233 N 0.000
KDM5B Macaca mulatta ENSMMUG00000015233 N 0.000
ENSMEUG00000014994 Macropus eugenii ENSMEUG00000014994 N 0.000
KDM5B Meleagris gallopavo ENSMGAG00000001393 N 0.000
MCINX012993 Melitaea cinxia MCINX012993 N 0.000
KDM5B Microcebus murinus ENSMICG00000006046 N 0.000
KDM5B Monodelphis domestica ENSMODG00000000755 N 0.000
MDOA009345 Musca domestica MDOA009345 N 0.000
ENSMPUG00000011183 Mustela putorius furo ENSMPUG00000011183 N 0.000
Kdm5d Mus musculus ENSMUSG00000056673 N 0.000
Kdm5b Mus musculus ENSMUSG00000042207 N 0.000
Myotis_brandtii_KDM5B_10012819 Myotis brandtii Myotis_brandtii_KDM5B_10012819 N 0.000
ENSMLUG00000015035 Myotis lucifugus ENSMLUG00000015035 N 0.000
ENSMLUG00000024285 Myotis lucifugus ENSMLUG00000024285 N 0.000
NV16665 Nasonia vitripennis NV16665 N 0.000
ENSNLEG00000018101 Nomascus leucogenys ENSNLEG00000018101 N 0.000
Ogr08783 Ophisaurus gracilis Ogr08783 N 0.000
ENSONIG00000019223 Oreochromis niloticus ENSONIG00000019223 N 0.000
ENSONIG00000016770 Oreochromis niloticus ENSONIG00000016770 N 0.000
KDM5B Ornithorhynchus anatinus ENSOANG00000002512 N 0.000
KDM5B Oryctolagus cuniculus ENSOCUG00000008003 N 0.000
kdm5bb Oryzias latipes ENSORLG00000014990 N 0.000
kdm5ba Oryzias latipes ENSORLG00000014767 N 0.000
ENSOARG00000018421 Ovis aries ENSOARG00000018421 N 0.000
ENSPTRG00000021925 Pan troglodytes ENSPTRG00000021925 N 0.000
KDM5B Pan troglodytes ENSPTRG00000001856 N 0.000
ENSPANG00000014633 Papio anubis ENSPANG00000014633 N 0.000
ENSPMAG00000003030 Petromyzon marinus ENSPMAG00000003030 N 0.000
ENSPFOG00000015221 Poecilia formosa ENSPFOG00000015221 N 0.000
ENSPFOG00000006840 Poecilia formosa ENSPFOG00000006840 N 0.000
ENSPPYG00000000346 Pongo abelii ENSPPYG00000000346 N 0.000
PXEA_0001524101 Protopolystoma xenopodis PXEA_0001524101 N 0.000
KDM5B Pteropus vampyrus ENSPVAG00000011030 N 0.000
Kdm5c Rattus norvegicus ENSRNOG00000057706 N 0.000
Kdm5b Rattus norvegicus ENSRNOG00000060544 N 0.000
Sakowv30029063m.g Saccoglossus kowalevskii Sakowv30029063m.g N 0.000
ENSSHAG00000015215 Sarcophilus harrisii ENSSHAG00000015215 N 0.000
KDM5B Sorex araneus ENSSARG00000012265 N 0.000
KDM5C Sorex araneus ENSSARG00000000542 N 0.000
SMAR004279 Strigamia maritima SMAR004279 N 0.000
KDM5B Sus scrofa ENSSSCG00000010928 N 0.000
KDM5B Taeniopygia guttata ENSTGUG00000001257 N 0.000
kdm5ba Takifugu rubripes ENSTRUG00000013308 N 0.000
kdm5ba Tetraodon nigroviridis ENSTNIG00000007074 N 0.000
fgeneshTM_pg.7_#_246 Tremella mesenterica fgeneshTM_pg.7_#_246 N 0.000
KDM5B Tupaia belangeri ENSTBEG00000006521 N 0.000
KDM5B Tursiops truncatus ENSTTRG00000001078 N 0.000
Tal_R003404 Tyto alba Tal_R003404 N 0.000
KDM5B Vicugna pacos ENSVPAG00000006056 N 0.000
kdm5b Xenopus tropicalis XB-GENE-856240 N 0.000
ENSXMAG00000003378 Xiphophorus maculatus ENSXMAG00000003378 N 0.000
ENSXMAG00000011463 Xiphophorus maculatus ENSXMAG00000011463 N 0.000