ENSSTOG00000012364 (Ictidomys tridecemlineatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSTOG00000012364 T037505_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Usf1
M01732_2.00
Mus musculus
NRYCACGTGNN

NNCACGTGRYN
PBM
Weirauch et al.(2014)
pTH4376
0.914 1.000
USF1
M02792_2.00
Homo sapiens
RNCACGTGRY

RYCACGTGNY
SELEX
Jolma et al.(2013)
USF1_1
0.914 1.000
USF1
M04146_2.00
Homo sapiens
NVCACGTGVCN

NGBCACGTGBN
SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX
0.914 1.000
USF1
M08056_2.00
Homo sapiens
RGTCACRTGVB

VBCAYGTGACY
ChIP-seq
Mathelier et al.(2014)
MA0093.2
0.914 1.000
USF1
M07807_2.00
Homo sapiens
VGTCACGTGRBSVVV

BBBSVYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha
0.914 1.000
USF1
M07808_2.00
Homo sapiens
VVGTCACGTGVBSVS

SBSVBCACGTGACBB
ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha
0.914 1.000
USF1
M07809_2.00
Homo sapiens
RGTCACGTGVBSVNN

NNBSVBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha
0.914 1.000
USF1
M07810_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha
0.914 1.000
USF1
M07811_2.00
Homo sapiens
NVGTCACGTGVSSV

BSSBCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha
0.914 1.000
USF1
M08733_2.00
Homo sapiens
VGTCACGTGVBS

SVBCACGTGACB
Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A
0.914 1.000
Usf1
M08756_2.00
Mus musculus
NNGTCACGTGVBS

SVBCACGTGACNN
Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A
0.914 1.000
USF1
M09460_2.00
Homo sapiens
YCACGTGRBN

NVYCACGTGR
Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465
0.914 1.000
USF1
M09867_2.00
Homo sapiens
NNRYCACGTGRYNN

NNRYCACGTGRYNN
Transfac
Matys et al.(2006)
V$USF_01
0.914 1.000
USF1
M09868_2.00
Homo sapiens
NNRNCAYRTGNYNN

NNRNCAYRTGNYNN
Transfac
Matys et al.(2006)
V$USF_02
0.914 1.000
USF1
M09869_2.00
Homo sapiens
HCACGTGH

DCACGTGD
Transfac
Matys et al.(2006)
V$USF_C
0.914 1.000
USF1
M04147_2.00
Homo sapiens
VHCAYGTGAYN

NRTCACRTGDB
SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000011083 bHLH 199 254

Links

Other bHLH family TFs
Other Ictidomys tridecemlineatus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G25050 Brachypodium distachyon BRADI2G25050 N 0.000
BRADI2G57200 Brachypodium distachyon BRADI2G57200 N 0.000
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I 0.000
LPERR05G13420 Leersia perrieri LPERR05G13420 N 0.000
LPERR01G34250 Leersia perrieri LPERR01G34250 N 0.000
GSMUA_Achr3G21790_001 Musa acuminata GSMUA_Achr3G21790_001 N 0.000
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N 0.000
OB01G48490 Oryza brachyantha OB01G48490 N 0.000
ORGLA05G0145800 Oryza glaberrima ORGLA05G0145800 N 0.000
OGLUM01G43950 Oryza glumaepatula OGLUM01G43950 N 0.000
BGIOSGA004939 Oryza indica BGIOSGA004939 N 0.000
BGIOSGA018034 Oryza indica BGIOSGA018034 N 0.000
OMERI05G14660 Oryza meridionalis OMERI05G14660 N 0.000
OMERI01G36600 Oryza meridionalis OMERI01G36600 N 0.000
ONIVA01G44590 Oryza nivara ONIVA01G44590 N 0.000
ONIVA05G17560 Oryza nivara ONIVA05G17560 N 0.000
OPUNC05G14870 Oryza punctata OPUNC05G14870 N 0.000
ORUFI01G43070 Oryza rufipogon ORUFI01G43070 N 0.000
OS01G0885900 Oryza sativa OS01G0885900 N 0.000
Pavir.J06813 Panicum virgatum Pavir.J06813 N 0.000
Sb03g042060 Sorghum bicolor Sb03g042060 N 0.000
Sb09g020690 Sorghum bicolor Sb09g020690 N 0.000
TRAES3BF106000020CFD_g Triticum aestivum TRAES3BF106000020CFD_g N 0.000
GRMZM2G481668 Zea mays GRMZM2G481668 N 0.000
GRMZM2G307152 Zea mays GRMZM2G307152 N 0.000