ENSSTOG00000012364 (Ictidomys tridecemlineatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSTOG00000012364 T037505_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Usf1
M01732_2.00
Mus musculus
NRYCACGTGNN

NNCACGTGRYN
PBM
Weirauch et al.(2014)
pTH4376
0.914 1.000
USF1
M02792_2.00
Homo sapiens
RNCACGTGRY

RYCACGTGNY
SELEX
Jolma et al.(2013)
USF1_1
0.914 1.000
USF1
M04146_2.00
Homo sapiens
NVCACGTGVCN

NGBCACGTGBN
SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX
0.914 1.000
USF1
M08056_2.00
Homo sapiens
RGTCACRTGVB

VBCAYGTGACY
ChIP-seq
Mathelier et al.(2014)
MA0093.2
0.914 1.000
USF1
M07807_2.00
Homo sapiens
VGTCACGTGRBSVVV

BBBSVYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha
0.914 1.000
USF1
M07808_2.00
Homo sapiens
VVGTCACGTGVBSVS

SBSVBCACGTGACBB
ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha
0.914 1.000
USF1
M07809_2.00
Homo sapiens
RGTCACGTGVBSVNN

NNBSVBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha
0.914 1.000
USF1
M07810_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha
0.914 1.000
USF1
M07811_2.00
Homo sapiens
NVGTCACGTGVSSV

BSSBCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha
0.914 1.000
USF1
M08733_2.00
Homo sapiens
VGTCACGTGVBS

SVBCACGTGACB
Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A
0.914 1.000
Usf1
M08756_2.00
Mus musculus
NNGTCACGTGVBS

SVBCACGTGACNN
Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A
0.914 1.000
USF1
M09460_2.00
Homo sapiens
YCACGTGRBN

NVYCACGTGR
Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465
0.914 1.000
USF1
M09867_2.00
Homo sapiens
NNRYCACGTGRYNN

NNRYCACGTGRYNN
Transfac
Matys et al.(2006)
V$USF_01
0.914 1.000
USF1
M09868_2.00
Homo sapiens
NNRNCAYRTGNYNN

NNRNCAYRTGNYNN
Transfac
Matys et al.(2006)
V$USF_02
0.914 1.000
USF1
M09869_2.00
Homo sapiens
HCACGTGH

DCACGTGD
Transfac
Matys et al.(2006)
V$USF_C
0.914 1.000
USF1
M04147_2.00
Homo sapiens
VHCAYGTGAYN

NRTCACRTGDB
SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000011083 bHLH 199 254

Links

Other bHLH family TFs
Other Ictidomys tridecemlineatus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_27777 Aegilops tauschii F775_27777 N 0.000
BRADI3G50930 Brachypodium distachyon BRADI3G50930 N 0.000
MLOC_43989 Hordeum vulgare MLOC_43989 N 0.000
LPERR04G17210 Leersia perrieri LPERR04G17210 N 0.000
OBART02G26880 Oryza barthii OBART02G26880 N 0.000
OBART04G21150 Oryza barthii OBART04G21150 N 0.000
OBART02G26890 Oryza barthii OBART02G26890 N 0.000
OB02G34120 Oryza brachyantha OB02G34120 N 0.000
OB02G34130 Oryza brachyantha OB02G34130 N 0.000
OB04G28190 Oryza brachyantha OB04G28190 N 0.000
ORGLA02G0231600 Oryza glaberrima ORGLA02G0231600 N 0.000
ORGLA02G0231500 Oryza glaberrima ORGLA02G0231500 N 0.000
ORGLA04G0182200 Oryza glaberrima ORGLA04G0182200 N 0.000
OGLUM02G27380 Oryza glumaepatula OGLUM02G27380 N 0.000
OGLUM02G27370 Oryza glumaepatula OGLUM02G27370 N 0.000
BGIOSGA008763 Oryza indica BGIOSGA008763 N 0.000
BGIOSGA016901 Oryza indica BGIOSGA016901 N 0.000
BGIOSGA008764 Oryza indica BGIOSGA008764 N 0.000
OLONG_010301 Oryza longistaminata OLONG_010301 N 0.000
OMERI04G17630 Oryza meridionalis OMERI04G17630 N 0.000
ONIVA06G04040 Oryza nivara ONIVA06G04040 N 0.000
ONIVA02G29390 Oryza nivara ONIVA02G29390 N 0.000
OPUNC02G24500 Oryza punctata OPUNC02G24500 N 0.000
OPUNC04G18860 Oryza punctata OPUNC04G18860 N 0.000
ORUFI02G28320 Oryza rufipogon ORUFI02G28320 N 0.000
ORUFI04G22740 Oryza rufipogon ORUFI04G22740 N 0.000
ORUFI02G28330 Oryza rufipogon ORUFI02G28330 N 0.000
OS02G0662700 Oryza sativa OS02G0662700 N 0.000
OS02G0663100 Oryza sativa OS02G0663100 N 0.000
OS04G0555000 Oryza sativa OS04G0555000 N 0.000
Pavir.Ga01057 Panicum virgatum Pavir.Ga01057 N 0.000
Si016508m.g Setaria italica Si016508m.g N 0.000
Sb04g032590 Sorghum bicolor Sb04g032590 N 0.000
Sb04g032570 Sorghum bicolor Sb04g032570 N 0.000
Sb06g024820 Sorghum bicolor Sb06g024820 N 0.000
Traes_6AL_4084532FC1 Triticum aestivum Traes_6AL_4084532FC1 N 0.000
Traes_6BL_972224088 Triticum aestivum Traes_6BL_972224088 N 0.000
TRIUR3_26732 Triticum urartu TRIUR3_26732 N 0.000
GRMZM2G098800 Zea mays GRMZM2G098800 N 0.000
GRMZM2G110579 Zea mays GRMZM2G110579 N 0.000
GRMZM5G825321 Zea mays GRMZM5G825321 N 0.000
GRMZM2G037792 Zea mays GRMZM2G037792 N 0.000