neurod6b (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000018633 T037803_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.869 0.885
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.869 0.885
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.869 0.885
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.869 0.885
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.869 0.885
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.869 0.885
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.869 0.885
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.869 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000021808 bHLH 93 145

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
neurod6b Takifugu rubripes ENSTRUG00000000001 I 0.893
neurod6b Takifugu rubripes ENSTRUG00000012378 I 0.893
ENSLACG00000013264 Latimeria chalumnae ENSLACG00000013264 I 0.869
ENSSTOG00000019627 Ictidomys tridecemlineatus ENSSTOG00000019627 I 0.869
NEUROD1 Loxodonta africana ENSLAFG00000000612 I 0.869
Alligator_sinensis_CCG009407.1 Alligator sinensis Alligator_sinensis_CCG009407.1 I 0.869
Afo_R010643 Aptenodytes forsteri Afo_R010643 I 0.869
ENSGMOG00000017265 Gadus morhua ENSGMOG00000017265 I 0.869
Neurod1 Rattus norvegicus ENSRNOG00000005609 I 0.869
NEUROD1 Gorilla gorilla ENSGGOG00000027940 I 0.869
NEUROD1 Gallus gallus ENSGALG00000008908 I 0.869
ENSBTAP00000002301-D1 Bos grunniens ENSBTAP00000002301-D1 I 0.869
ENSPANG00000007303 Papio anubis ENSPANG00000007303 I 0.869
Cmyd_10010338 Chelonia mydas Cmyd_10010338 I 0.869
ENSMEUG00000016098 Macropus eugenii ENSMEUG00000016098 I 0.869
neurod6b Oryzias latipes ENSORLG00000017789 I 0.869
ENSMICG00000012663 Microcebus murinus ENSMICG00000012663 I 0.869
Neurod1 Mus musculus ENSMUSG00000034701 D 0.869
ENSMPUG00000019108 Mustela putorius furo ENSMPUG00000019108 I 0.869
ENSONIG00000009263 Oreochromis niloticus ENSONIG00000009263 I 0.869
ENSNLEG00000006322 Nomascus leucogenys ENSNLEG00000006322 I 0.869
NEUROD1 Ornithorhynchus anatinus ENSOANG00000003630 I 0.869
ENSTSYG00000012547 Tarsius syrichta ENSTSYG00000012547 I 0.869
NEUROD1 Tursiops truncatus ENSTTRG00000016757 I 0.869
NEUROD1 Monodelphis domestica ENSMODG00000010392 I 0.869
Aan_R008719 Calypte anna Aan_R008719 I 0.869
NEUROD1 Otolemur garnettii ENSOGAG00000025613 I 0.869
NEUROD1 Myotis lucifugus ENSMLUG00000025259 I 0.869
NEUROD1 Macaca mulatta ENSMMUG00000008296 I 0.869
ENSXMAG00000019613 Xiphophorus maculatus ENSXMAG00000019613 I 0.869
NEUROD1 Ochotona princeps ENSOPRG00000008607 I 0.869
ENSP00000295108 Macaca fascicularis ENSP00000295108 I 0.869
NEUROD1 Sorex araneus ENSSARG00000008648 I 0.869
NEUROD1 Cavia porcellus ENSCPOG00000025248 I 0.869
ENSCSAG00000018652 Chlorocebus sabaeus ENSCSAG00000018652 I 0.869
ENSAMEG00000019191 Ailuropoda melanoleuca ENSAMEG00000019191 I 0.869
ENSSHAG00000015217 Sarcophilus harrisii ENSSHAG00000015217 I 0.869
ENSPPYG00000029484 Pongo abelii ENSPPYG00000029484 I 0.869
NEUROD1 Callithrix jacchus ENSCJAG00000011529 I 0.869
NEUROD1 Bos taurus ENSBTAG00000001755 I 0.869
ENSPSIG00000001006 Pelodiscus sinensis ENSPSIG00000001006 I 0.869
AAY99628 Xenopus tropicalis AAY99628 I 0.869
ENSAPLG00000001566 Anas platyrhynchos ENSAPLG00000001566 I 0.869
NEUROD1 Pan troglodytes ENSPTRG00000012702 I 0.869
ENSPMAG00000007548 Petromyzon marinus ENSPMAG00000007548 I 0.869
NEUROD1 Sus scrofa ENSSSCG00000016011 I 0.869
ENSFALG00000015273 Ficedula albicollis ENSFALG00000015273 I 0.869
NEUROD1 Procavia capensis ENSPCAG00000008927 I 0.869
NEUROD1 Felis catus ENSFCAG00000004553 I 0.869
Gfo_R001419 Geospiza fortis Gfo_R001419 I 0.869
NEUROD1 Homo sapiens ENSG00000162992 D 0.869
NEUROD1 Echinops telfairi ENSETEG00000018112 I 0.869
Myotis_brandtii_NEUROD1_10035039 Myotis brandtii Myotis_brandtii_NEUROD1_10035039 I 0.869
Ogr07339 Ophisaurus gracilis Ogr07339 I 0.869
NEUROD1 Dasypus novemcinctus ENSDNOG00000012297 I 0.869
ENSDORG00000012142 Dipodomys ordii ENSDORG00000012142 I 0.869
NEUROD1 Equus caballus ENSECAG00000012181 I 0.869
ENSPFOG00000005949 Poecilia formosa ENSPFOG00000005949 I 0.869
neurod1 Xenopus tropicalis XB-GENE-963757 I 0.869
gw.499.29.1 Branchiostoma floridae gw.499.29.1 I 0.859
Neurod6 Rattus norvegicus ENSRNOG00000026055 I 0.849
ENSSTOG00000002956 Ictidomys tridecemlineatus ENSSTOG00000002956 I 0.849
neurod1 Tetraodon nigroviridis ENSTNIG00000003533 I 0.849
NEUROD6 Tupaia belangeri ENSTBEG00000013747 I 0.849
ENSSHAG00000009773 Sarcophilus harrisii ENSSHAG00000009773 I 0.849
NEUROD6 Taeniopygia guttata ENSTGUG00000001910 I 0.849
Alligator_sinensis_CCG020348.1 Alligator sinensis Alligator_sinensis_CCG020348.1 I 0.849
Sakowv30011934m.g Saccoglossus kowalevskii Sakowv30011934m.g I 0.849
Tal_R006127 Tyto alba Tal_R006127 I 0.849
Pvit_17470 Pogona vitticeps Pvit_17470 I 0.849
Ogr14107 Ophisaurus gracilis Ogr14107 I 0.849
2111505A Xenopus laevis 2111505A I 0.849
neurod1.L Xenopus laevis XB-GENE-6252655 I 0.849
neurod6.L Xenopus laevis XB-GENE-969232 I 0.849
neurod6 Xenopus tropicalis XB-GENE-969227 I 0.849
neurod1.S Xenopus laevis XB-GENE-963762 I 0.849
Myotis_brandtii_NEUROD6_10033978 Myotis brandtii Myotis_brandtii_NEUROD6_10033978 I 0.849
Gfo_R005849 Geospiza fortis Gfo_R005849 I 0.849
Aan_R004820 Calypte anna Aan_R004820 I 0.849
ENSXMAG00000001517 Xiphophorus maculatus ENSXMAG00000001517 I 0.849
NEUROD6 Tursiops truncatus ENSTTRG00000000347 I 0.849
Afo_R007497 Aptenodytes forsteri Afo_R007497 I 0.849
Brh_R011298 Buceros rhinoceros Brh_R011298 I 0.849
ENSP00000297142 Macaca fascicularis ENSP00000297142 I 0.849
ENSBTAP00000000728-D1 Bos grunniens ENSBTAP00000000728-D1 I 0.849
Cmyd_10009140 Chelonia mydas Cmyd_10009140 I 0.849
neurod1 Takifugu rubripes ENSTRUG00000014252 I 0.849
ENSONIG00000006878 Oreochromis niloticus ENSONIG00000006878 I 0.849
ENSFALG00000014089 Ficedula albicollis ENSFALG00000014089 I 0.849
NEUROD6 Felis catus ENSFCAG00000026161 I 0.849
NEUROD6 Erinaceus europaeus ENSEEUG00000007073 I 0.849
NEUROD6 Equus caballus ENSECAG00000020776 I 0.849
NEUROD6 Dasypus novemcinctus ENSDNOG00000014272 I 0.849
NEUROD6 Homo sapiens ENSG00000164600 I 0.849
neurod1 Gasterosteus aculeatus ENSGACG00000002064 I 0.849
ENSGMOG00000014666 Gadus morhua ENSGMOG00000014666 I 0.849
NEUROD6 Gorilla gorilla ENSGGOG00000026908 I 0.849
ENSGALG00000012235 Gallus gallus ENSGALG00000012235 I 0.849
neurod6b Gasterosteus aculeatus ENSGACG00000017176 I 0.849
neurod6a Danio rerio ENSDARG00000040008 I 0.849
neurod6b Danio rerio ENSDARG00000020794 I 0.849
ENSAPLG00000009187 Anas platyrhynchos ENSAPLG00000009187 I 0.849
ENSAMXG00000014944 Astyanax mexicanus ENSAMXG00000014944 I 0.849
ENSAMXG00000001281 Astyanax mexicanus ENSAMXG00000001281 I 0.849
ENSAMEG00000019439 Ailuropoda melanoleuca ENSAMEG00000019439 I 0.849
NEUROD6 Bos taurus ENSBTAG00000000558 I 0.849
NEUROD6 Canis familiaris ENSCAFG00000003122 I 0.849
neurod1 Danio rerio ENSDARG00000019566 I 0.849
ENSCSAG00000019605 Chlorocebus sabaeus ENSCSAG00000019605 I 0.849
NEUROD6 Cavia porcellus ENSCPOG00000006406 I 0.849
NEUROD6 Callithrix jacchus ENSCJAG00000008997 I 0.849
ENSLACG00000002237 Latimeria chalumnae ENSLACG00000002237 I 0.849
NEUROD6 Loxodonta africana ENSLAFG00000018034 I 0.849
NEUROD6 Ochotona princeps ENSOPRG00000006565 I 0.849
ENSONIG00000021273 Oreochromis niloticus ENSONIG00000021273 I 0.849
NEUROD6 Anolis carolinensis ENSACAG00000009699 I 0.849
NEUROD6 Otolemur garnettii ENSOGAG00000001911 I 0.849
neurod1 Oryzias latipes ENSORLG00000010563 I 0.849
NEUROD6 Procavia capensis ENSPCAG00000005309 I 0.849
NEUROD6 Pan troglodytes ENSPTRG00000019050 I 0.849
ENSPSIG00000000416 Pelodiscus sinensis ENSPSIG00000000416 I 0.849
ENSPPYG00000017666 Pongo abelii ENSPPYG00000017666 I 0.849
ENSPFOG00000014944 Poecilia formosa ENSPFOG00000014944 I 0.849
ENSOARG00000008435 Ovis aries ENSOARG00000008435 I 0.849
NEUROD6 Ornithorhynchus anatinus ENSOANG00000011606 I 0.849
NEUROD6 Microcebus murinus ENSMICG00000012974 I 0.849
NEUROD6 Meleagris gallopavo ENSMGAG00000012144 I 0.849
ENSLOCG00000017829 Lepisosteus oculatus ENSLOCG00000017829 I 0.849
ENSLOCG00000012935 Lepisosteus oculatus ENSLOCG00000012935 I 0.849
NEUROD6 Myotis lucifugus ENSMLUG00000017761 I 0.849
NEUROD6 Macaca mulatta ENSMMUG00000022699 I 0.849
ENSNLEG00000015231 Nomascus leucogenys ENSNLEG00000015231 I 0.849
Neurod6 Mus musculus ENSMUSG00000037984 I 0.849
ENSMPUG00000005372 Mustela putorius furo ENSMPUG00000005372 I 0.849
NEUROD6 Monodelphis domestica ENSMODG00000013299 I 0.849
NEUROD6 Pteropus vampyrus ENSPVAG00000014789 I 0.849