CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000019821
(
Tetraodon nigroviridis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTNIG00000019821
T037809_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EPAS1
M08719_2.00
Homo sapiens
VDACGTGMN
NKCACGTHB
Misc
Kulakovskiy et al.(2013)
EPAS1_HUMAN.H11MO.0.B
0.858
0.925
EPAS1
M09455_2.00
Homo sapiens
KCACGTMBNH
DNVKACGTGM
Misc
Heinz et al.(2010)
785_O-HIF2a_GSE34871
0.858
0.925
EPAS1
M09826_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF2A_01
0.858
0.925
EPAS1
M09827_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF2A_Q6
0.858
0.925
HIF1A
M08049_2.00
Homo sapiens
NBACGTGCNN
NNGCACGTVN
ChIP-seq
Mathelier et al.(2014)
MA1106.1
0.857
0.811
HIF1A
M08713_2.00
Homo sapiens
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C
0.857
0.811
Hif1a
M08750_2.00
Mus musculus
VDACGTGM
KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C
0.857
0.811
HIF1A
M09454_2.00
Homo sapiens
KACGTGMN
NKCACGTM
Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352
0.857
0.811
HIF1A
M09807_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q3
0.857
0.811
HIF1A
M09808_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q5
0.857
0.811
HIF1A
M09809_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q6
0.857
0.811
HIF1A
M09810_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q3
0.857
0.811
HIF1A
M09811_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q5
0.857
0.811
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000023088
bHLH
7
59
RKEKSRDAARCRRSKETEVFYDLAHQLPLPHSVSAHLDKASIMRLAISFLRTR
Links
Other
bHLH
family TFs
Other
Tetraodon nigroviridis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy