tfeb (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000000653 T037813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tfeb
M01728_2.00
Mus musculus
CWCGTGAY

RTCACGWG
PBM
Weirauch et al.(2014)
pTH5072
0.871 0.868
TFEB
M02781_2.00
Homo sapiens
RNCACGTGAY

RTCACGTGNY
SELEX
Jolma et al.(2013)
TFEB_1
0.871 0.868
TFEB
M02727_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2010)
TFEB_dimer
0.871 0.868
TFEB
M04088_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX
0.871 0.868
TFEB
M08718_2.00
Homo sapiens
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C
0.871 0.868
Tfeb
M08753_2.00
Mus musculus
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C
0.871 0.868
TFEB
M04089_2.00
Homo sapiens
VNCATGTGAYN

NRTCACATGNB
SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX
0.871 0.868
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000001557 bHLH 236 289
ENSTRUP00000001558 bHLH 229 282
ENSTRUP00000001559 bHLH 250 303
ENSTRUP00000001560 bHLH 228 281
ENSTRUP00000001561 bHLH 160 213

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSLOCG00000012145 Lepisosteus oculatus ENSLOCG00000012145 I 0.914
ENSLACG00000013218 Latimeria chalumnae ENSLACG00000013218 I 0.914
ENSPFOG00000017022 Poecilia formosa ENSPFOG00000017022 I 0.914
tfeb Tetraodon nigroviridis ENSTNIG00000007281 I 0.914
ENSXMAG00000003856 Xiphophorus maculatus ENSXMAG00000003856 I 0.914
tfeb Danio rerio ENSDARG00000010794 I 0.914
ENSONIG00000019306 Oreochromis niloticus ENSONIG00000019306 I 0.914
ENSAMXG00000007343 Astyanax mexicanus ENSAMXG00000007343 I 0.914
tfeb Oryzias latipes ENSORLG00000015866 I 0.889
TFEB Sus scrofa ENSSSCG00000001621 I 0.871
ENSSTOG00000015338 Ictidomys tridecemlineatus ENSSTOG00000015338 I 0.871
ENSTGUG00000017433 Taeniopygia guttata ENSTGUG00000017433 I 0.871
ENSAPLG00000010269 Anas platyrhynchos ENSAPLG00000010269 I 0.871
ENSSHAG00000009705 Sarcophilus harrisii ENSSHAG00000009705 I 0.871
TFEB Pteropus vampyrus ENSPVAG00000007581 I 0.871
ENSCSAG00000011274 Chlorocebus sabaeus ENSCSAG00000011274 I 0.871
ENSPPYG00000016599 Pongo abelii ENSPPYG00000016599 I 0.871
ENSPSIG00000010995 Pelodiscus sinensis ENSPSIG00000010995 I 0.871
TFEB Pan troglodytes ENSPTRG00000018157 I 0.871
Tfeb Rattus norvegicus ENSRNOG00000014666 I 0.871
ENSTTRG00000016385 Tursiops truncatus ENSTTRG00000016385 I 0.871
ENSP00000343948 Macaca fascicularis ENSP00000343948 I 0.871
ENSP00000343948-D1 Bos grunniens ENSP00000343948-D1 I 0.871
Gfo_R002984 Geospiza fortis Gfo_R002984 I 0.871
Myotis_brandtii_TFEB_10015405 Myotis brandtii Myotis_brandtii_TFEB_10015405 I 0.871
Ogr06907 Ophisaurus gracilis Ogr06907 I 0.871
Cmyd_10010632 Chelonia mydas Cmyd_10010632 I 0.871
Brh_R005039 Buceros rhinoceros Brh_R005039 I 0.871
ENSAMEG00000013103 Ailuropoda melanoleuca ENSAMEG00000013103 I 0.871
Aan_R003797 Calypte anna Aan_R003797 I 0.871
Afo_R002063 Aptenodytes forsteri Afo_R002063 I 0.871
Alligator_sinensis_CCG020422.1 Alligator sinensis Alligator_sinensis_CCG020422.1 I 0.871
Pvit_06044 Pogona vitticeps Pvit_06044 I 0.871
TFEB Bos taurus ENSBTAG00000012384 I 0.871
TFEB Callithrix jacchus ENSCJAG00000004199 I 0.871
TFEB Gorilla gorilla ENSGGOG00000002683 I 0.871
TFEB Loxodonta africana ENSLAFG00000003059 I 0.871
TFEB Canis familiaris ENSCAFG00000001599 I 0.871
TFEB Meleagris gallopavo ENSMGAG00000006159 I 0.871
ENSGALG00000003404 Gallus gallus ENSGALG00000003404 I 0.871
TFEB Homo sapiens ENSG00000112561 D 0.871
TFEB Cavia porcellus ENSCPOG00000008027 I 0.871
TFEB Equus caballus ENSECAG00000019762 I 0.871
ENSFALG00000003097 Ficedula albicollis ENSFALG00000003097 I 0.871
TFEB Felis catus ENSFCAG00000011521 I 0.871
TFEB Microcebus murinus ENSMICG00000015674 I 0.871
TFEB Myotis lucifugus ENSMLUG00000000232 I 0.871
ENSOARG00000002322 Ovis aries ENSOARG00000002322 I 0.871
TFEB Ornithorhynchus anatinus ENSOANG00000015438 I 0.871
TFEB Oryctolagus cuniculus ENSOCUG00000027474 I 0.871
TFEB Otolemur garnettii ENSOGAG00000010116 I 0.871
TFEB Anolis carolinensis ENSACAG00000002664 I 0.871
ENSNLEG00000004906 Nomascus leucogenys ENSNLEG00000004906 I 0.871
Tfeb Mus musculus ENSMUSG00000023990 D 0.871
TFEB Macaca mulatta ENSMMUG00000004690 I 0.871
Tal_R006591 Tyto alba Tal_R006591 I 0.871
ENSMPUG00000013594 Mustela putorius furo ENSMPUG00000013594 I 0.871
ENSPANG00000009713 Papio anubis ENSPANG00000009713 I 0.871
ENSSTOG00000005880 Ictidomys tridecemlineatus ENSSTOG00000005880 N 0.857
SPU_008175 Strongylocentrotus purpuratus SPU_008175 N 0.852
ENSPMAG00000001002 Petromyzon marinus ENSPMAG00000001002 I 0.843
TFEB Monodelphis domestica ENSMODG00000012916 I 0.839