CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tfeb
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000000653
T037813_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tfeb
M01728_2.00
Mus musculus
CWCGTGAY
RTCACGWG
PBM
Weirauch et al.(2014)
pTH5072
0.871
0.868
TFEB
M02781_2.00
Homo sapiens
RNCACGTGAY
RTCACGTGNY
SELEX
Jolma et al.(2013)
TFEB_1
0.871
0.868
TFEB
M02727_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Jolma et al.(2010)
TFEB_dimer
0.871
0.868
TFEB
M04088_2.00
Homo sapiens
YVCACGTGAYN
NRTCACGTGBR
SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX
0.871
0.868
TFEB
M08718_2.00
Homo sapiens
CACGTGAYY
RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C
0.871
0.868
Tfeb
M08753_2.00
Mus musculus
CACGTGAYY
RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C
0.871
0.868
TFEB
M04089_2.00
Homo sapiens
VNCATGTGAYN
NRTCACATGNB
SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX
0.871
0.868
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000001557
bHLH
236
289
KKDNHNLIERRRRFNINDRIKELGTIIPKTNDLDVRWNKGTILRASVEYIKQMQ
ENSTRUP00000001558
bHLH
229
282
KKDNHNLIERRRRFNINDRIKELGTIIPKTNDLDVRWNKGTILRASVEYIKQMQ
ENSTRUP00000001559
bHLH
250
303
KKDNHNLIERRRRFNINDRIKELGTIIPKTNDLDVRWNKGTILRASVEYIKQMQ
ENSTRUP00000001560
bHLH
228
281
KKDNHNLIERRRRFNINDRIKELGTIIPKTNDLDVRWNKGTILRASVEYIKQMQ
ENSTRUP00000001561
bHLH
160
213
KKDNHNLIERRRRFNINDRIKELGTIIPKTNDLDVRWNKGTILRASVEYIKQMQ
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy