tfe3a (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000005584 T037843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY

RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.914 0.981
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.914 0.981
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.914 0.981
TFE3
M09790_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.914 0.981
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB

VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.914 0.981
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN

NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.871 0.963
Tfe3
M05833_2.00
Mus musculus
CACGTGAY

RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.871 0.963
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.871 0.963
Tfe3
M09884_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.871 0.963
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN

NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.871 0.944
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN

NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.871 0.944
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH

DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.871 0.944
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY

RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.871 0.944
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB

VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.871 0.944
MITF
M09880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.871 0.944
MITF
M09881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.871 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000013460 bHLH 288 341
ENSTRUP00000013461 bHLH 289 342
ENSTRUP00000013462 bHLH 304 357
ENSTRUP00000013463 bHLH 199 252

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TFE3 Homo sapiens ENSG00000068323 D 0.914
TFE3 Tursiops truncatus ENSTTRG00000009064 I 0.914
TFE3 Pteropus vampyrus ENSPVAG00000009435 I 0.914
ENSNLEG00000007963 Nomascus leucogenys ENSNLEG00000007963 I 0.914
ENSXMAG00000003547 Xiphophorus maculatus ENSXMAG00000003547 I 0.914
TFE3 Felis catus ENSFCAG00000002574 I 0.914
TFE3 Oryctolagus cuniculus ENSOCUG00000015807 I 0.914
TFE3 Sus scrofa ENSSSCG00000012287 I 0.914
TFE3 Equus caballus ENSECAG00000020642 I 0.914
ENSOARG00000011157 Ovis aries ENSOARG00000011157 I 0.914
TFE3 Gorilla gorilla ENSGGOG00000014023 I 0.914
ENSLOCG00000014691 Lepisosteus oculatus ENSLOCG00000014691 I 0.914
TFE3 Microcebus murinus ENSMICG00000009708 I 0.914
TFE3 Macaca mulatta ENSMMUG00000023494 I 0.914
TFE3 Myotis lucifugus ENSMLUG00000030217 I 0.914
ENSMPUG00000013794 Mustela putorius furo ENSMPUG00000013794 I 0.914
TFE3 Loxodonta africana ENSLAFG00000025585 I 0.914
ENSPFOG00000001499 Poecilia formosa ENSPFOG00000001499 I 0.914
ENSGMOG00000018115 Gadus morhua ENSGMOG00000018115 I 0.914
TFE3 Sorex araneus ENSSARG00000000644 I 0.914
TFE3 Dasypus novemcinctus ENSDNOG00000039173 I 0.914
ENSPPYG00000029376 Pongo abelii ENSPPYG00000029376 I 0.914
TFE3 Bos taurus ENSBTAG00000008523 I 0.914
TFE3 Canis familiaris ENSCAFG00000015765 I 0.914
TFE3 Ochotona princeps ENSOPRG00000007735 I 0.914
tfe3b Oryzias latipes ENSORLG00000014134 I 0.914
tfe3.S Xenopus laevis XB-GENE-5918226 I 0.914
TFE3 Procavia capensis ENSPCAG00000003945 I 0.914
ENSAMEG00000012353 Ailuropoda melanoleuca ENSAMEG00000012353 I 0.914
ENSPANG00000013676 Papio anubis ENSPANG00000013676 I 0.914
ENSONIG00000020291 Oreochromis niloticus ENSONIG00000020291 I 0.914
Myotis_brandtii_TFE3_10010865 Myotis brandtii Myotis_brandtii_TFE3_10010865 I 0.914
ENSPMAG00000008619 Petromyzon marinus ENSPMAG00000008619 I 0.914
ENSONIG00000000820 Oreochromis niloticus ENSONIG00000000820 I 0.914
tfe3a Danio rerio ENSDARG00000098903 I 0.914
TFE3 Otolemur garnettii ENSOGAG00000031330 I 0.914
ENSP00000338360-D1 Bos grunniens ENSP00000338360-D1 I 0.914
ENSMMUP00000030934 Macaca fascicularis ENSMMUP00000030934 I 0.914
ENSCSAG00000013021 Chlorocebus sabaeus ENSCSAG00000013021 I 0.914
ENSSHAG00000003327 Sarcophilus harrisii ENSSHAG00000003327 I 0.901
ENSPMAG00000001002 Petromyzon marinus ENSPMAG00000001002 I 0.882
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I 0.871
Mitf Rattus norvegicus ENSRNOG00000008658 I 0.871
MITF Pan troglodytes ENSPTRG00000015100 I 0.871
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I 0.871
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I 0.871
Tfe3 Rattus norvegicus ENSRNOG00000009605 I 0.871
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I 0.871
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I 0.871
MITF Sorex araneus ENSSARG00000002538 I 0.871
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I 0.871
mitfa Takifugu rubripes ENSTRUG00000001600 I 0.871
ENSP00000391803 Macaca fascicularis ENSP00000391803 I 0.871
Gfo_R014572 Geospiza fortis Gfo_R014572 I 0.871
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I 0.871
Brh_R009446 Buceros rhinoceros Brh_R009446 I 0.871
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I 0.871
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I 0.871
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I 0.871
Pvit_00330 Pogona vitticeps Pvit_00330 I 0.871
mitf.L Xenopus laevis XB-GENE-6252679 I 0.871
mitf.S Xenopus laevis XB-GENE-6464338 I 0.871
mitf Xenopus tropicalis XB-GENE-484962 I 0.871
Tal_R001329 Tyto alba Tal_R001329 I 0.871
Pvit_01233 Pogona vitticeps Pvit_01233 I 0.871
Afo_R011673 Aptenodytes forsteri Afo_R011673 I 0.871
Aan_R007225 Calypte anna Aan_R007225 I 0.871
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I 0.871
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I 0.871
tfe3b Tetraodon nigroviridis ENSTNIG00000007324 I 0.871
MITF Taeniopygia guttata ENSTGUG00000009847 I 0.871
MITF Tupaia belangeri ENSTBEG00000017713 I 0.871
mitfb Takifugu rubripes ENSTRUG00000012080 I 0.871
tfe3b Takifugu rubripes ENSTRUG00000013198 I 0.871
ENSXMAG00000007656 Xiphophorus maculatus ENSXMAG00000007656 I 0.871
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I 0.871
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I 0.871
MITF Tursiops truncatus ENSTTRG00000007072 I 0.871
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I 0.871
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I 0.871
MITF Otolemur garnettii ENSOGAG00000000043 I 0.871
MITF Equus caballus ENSECAG00000005360 I 0.871
MITF Erinaceus europaeus ENSEEUG00000005163 I 0.871
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I 0.871
Mitf Dipodomys ordii ENSDORG00000003336 I 0.871
MITF Dasypus novemcinctus ENSDNOG00000037006 I 0.871
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I 0.871
MITF Felis catus ENSFCAG00000024419 I 0.871
mitfa Gasterosteus aculeatus ENSGACG00000011875 I 0.871
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I 0.871
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I 0.871
mitfb Gasterosteus aculeatus ENSGACG00000003425 I 0.871
MITF Homo sapiens ENSG00000187098 D 0.871
mitfb Danio rerio ENSDARG00000037833 I 0.871
tfe3b Danio rerio ENSDARG00000019457 I 0.871
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I 0.871
MITF Bos taurus ENSBTAG00000006679 I 0.871
ENSAMXG00000020781 Astyanax mexicanus ENSAMXG00000020781 I 0.871
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I 0.871
TFE3 Anolis carolinensis ENSACAG00000022140 I 0.871
MITF Canis familiaris ENSCAFG00000006496 I 0.871
MITF Callithrix jacchus ENSCJAG00000013260 I 0.871
mitfa Danio rerio ENSDARG00000003732 I 0.871
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I 0.871
MITF Cavia porcellus ENSCPOG00000014963 I 0.871
TFE3 Cavia porcellus ENSCPOG00000012410 I 0.871
MITF Gorilla gorilla ENSGGOG00000024338 I 0.871
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I 0.871
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I 0.871
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I 0.871
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I 0.871
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I 0.871
Mitf Mus musculus ENSMUSG00000035158 D 0.871
MITF Oryctolagus cuniculus ENSOCUG00000002190 I 0.871
MITF Anolis carolinensis ENSACAG00000013586 I 0.871
mitfb Oryzias latipes ENSORLG00000013461 I 0.871
mitfa Oryzias latipes ENSORLG00000003123 I 0.871
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I 0.871
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I 0.871
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I 0.871
Tfe3 Mus musculus ENSMUSG00000000134 D 0.871
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I 0.871
MITF Meleagris gallopavo ENSMGAG00000009507 I 0.871
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I 0.871
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I 0.871
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I 0.871
MITF Myotis lucifugus ENSMLUG00000002587 I 0.871
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I 0.871
MITF Loxodonta africana ENSLAFG00000023153 I 0.871
MITF Monodelphis domestica ENSMODG00000003754 I 0.871
MITF Macaca mulatta ENSMMUG00000002100 I 0.871
ENSTNIG00000019469 Tetraodon nigroviridis ENSTNIG00000019469 I 0.869
ENSCING00000004702 Ciona intestinalis ENSCING00000004702 I 0.861
ENSCSAVG00000010462 Ciona savignyi ENSCSAVG00000010462 I 0.861
TFE3 Monodelphis domestica ENSMODG00000009925 I 0.858
e_gw.492.5.1 Branchiostoma floridae e_gw.492.5.1 I 0.845