srebf1 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000008197 T037861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY

RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.882 0.922
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB

VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.882 0.922
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY

RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.882 0.922
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH

DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.882 0.922
SREBF1
M09796_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.882 0.922
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB

VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.882 0.922
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC

GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.882 0.922
SREBF1
M09799_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.882 0.922
SREBF1
M09800_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.882 0.922
SREBF1
M09801_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.882 0.922
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY

RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.882 0.922
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY

RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.882 0.922
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB

VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.882 0.902
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD

HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.882 0.902
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.882 0.902
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN

NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.882 0.902
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY

RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.858 0.745
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH

DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.858 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000020514 bHLH 328 378
ENSTRUP00000020515 bHLH 323 373
ENSTRUP00000020516 bHLH 268 318
ENSTRUP00000020517 bHLH 242 292

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SREBF1 Procavia capensis ENSPCAG00000014903 I 0.882
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I 0.882
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I 0.882
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I 0.882
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I 0.882
srebf1 Oryzias latipes ENSORLG00000009437 I 0.882
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I 0.882
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I 0.882
SREBF1 Otolemur garnettii ENSOGAG00000002910 I 0.882
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I 0.882
SREBF1 Ochotona princeps ENSOPRG00000015069 I 0.882
Srebf1 Rattus norvegicus ENSRNOG00000003463 I 0.882
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I 0.882
Gfo_R006283 Geospiza fortis Gfo_R006283 I 0.882
ENSP00000348069 Macaca fascicularis ENSP00000348069 I 0.882
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I 0.882
srebf1 Xenopus tropicalis XB-GENE-987572 I 0.882
XP_002944649 Xenopus tropicalis XP_002944649 I 0.882
Aan_R009070 Calypte anna Aan_R009070 I 0.882
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I 0.882
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I 0.882
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I 0.882
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I 0.882
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I 0.882
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I 0.882
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I 0.882
SREBF1 Echinops telfairi ENSETEG00000004179 I 0.882
SREBF1 Equus caballus ENSECAG00000019802 I 0.882
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I 0.882
SREBF1 Homo sapiens ENSG00000072310 D 0.882
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I 0.882
Srebf1 Dipodomys ordii ENSDORG00000012333 I 0.882
srebf1 Danio rerio ENSDARG00000067607 I 0.882
Srebf1 Mus musculus ENSMUSG00000020538 D 0.882
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I 0.882
SREBF1 Cavia porcellus ENSCPOG00000002439 I 0.882
SREBF1 Callithrix jacchus ENSCJAG00000008953 I 0.882
SREBF1 Canis familiaris ENSCAFG00000018436 I 0.882
SREBF1 Gallus gallus ENSGALG00000027188 I 0.882
SREBF1 Felis catus ENSFCAG00000001983 I 0.882
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I 0.882
SREBF1 Bos taurus ENSBTAG00000007884 I 0.882
SREBF1 Microcebus murinus ENSMICG00000012535 I 0.882
SREBF1 Macaca mulatta ENSMMUG00000023375 I 0.882
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I 0.882
SREBF1 Monodelphis domestica ENSMODG00000014074 I 0.882
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I 0.882
ENSGMOG00000011626 Gadus morhua ENSGMOG00000011626 I 0.882
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I 0.882
SREBF1 Loxodonta africana ENSLAFG00000021644 I 0.882
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I 0.882
SREBF1 Gorilla gorilla ENSGGOG00000002713 I 0.882
NV10553 Nasonia vitripennis NV10553 I 0.858
YQE_07365 Dendroctonus ponderosae YQE_07365 I 0.858
tetur08g03870 Tetranychus urticae tetur08g03870 I 0.858
Pvit_05020 Pogona vitticeps Pvit_05020 I 0.858
LotgiG224211 Lottia gigantea LotgiG224211 I 0.858
Ocbimv22024635m.g Octopus bimaculoides Ocbimv22024635m.g I 0.858
Ogr11708 Ophisaurus gracilis Ogr11708 I 0.858
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I 0.858
SREBP Drosophila virilis FBgn0198580 I 0.858
SREBP Drosophila persimilis FBgn0153336 I 0.858
SREBP Drosophila simulans FBgn0186498 I 0.858
SREBP Drosophila grimshawi FBgn0122129 I 0.858
SREBP Drosophila erecta FBgn0108291 I 0.858
SREBP Drosophila pseudoobscura FBgn0081122 I 0.858
SREBP Drosophila ananassae FBgn0100584 I 0.858
SREBP Drosophila willistoni FBgn0219495 I 0.858
SREBP Drosophila sechellia FBgn0174544 I 0.858
SREBP Drosophila yakuba FBgn0236960 I 0.858
HLH106 Drosophila melanogaster FBgn0261283 D 0.858
SINV16629 Solenopsis invicta SINV16629 I 0.856
L798_14382 Zootermopsis nevadensis L798_14382 I 0.856
Hsal_02671--XP_396866.3_APIME Harpegnathos saltator Hsal_02671--XP_396866.3_APIME I 0.856
GB54953 Apis mellifera GB54953 I 0.856
SMAR011485 Strigamia maritima SMAR011485 I 0.856
ENSPSIG00000005996 Pelodiscus sinensis ENSPSIG00000005996 I 0.855
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I 0.854
HMEL008680 Heliconius melpomene HMEL008680 I 0.853
KGM_21476 Danaus plexippus KGM_21476 I 0.853
LLOJ009997 Lutzomyia longipalpis LLOJ009997 N 0.849
MDOA000648 Musca domestica MDOA000648 I 0.847
LCUP004742 Lucilia cuprina LCUP004742 I 0.847
Sakowv30028178m.g Saccoglossus kowalevskii Sakowv30028178m.g I 0.843
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I 0.842