atoh1a (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000012647 T037891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN

NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.860 0.885
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.860 0.885
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY

RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.860 0.885
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.860 0.885
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.860 0.885
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.860 0.885
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY

RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.860 0.885
ATOH1
M09877_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.860 0.885
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY

RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.860 0.885
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY

RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.860 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000032008 bHLH 131 183

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA018341 Oryza indica BGIOSGA018341 N 0.000
LPERR05G08450 Leersia perrieri LPERR05G08450 N 0.000
LPERR05G09460 Leersia perrieri LPERR05G09460 N 0.000
OB06G21000 Oryza brachyantha OB06G21000 N 0.000
OB06G21020 Oryza brachyantha OB06G21020 N 0.000
OGLUM05G11150 Oryza glumaepatula OGLUM05G11150 N 0.000
OMERI05G09060 Oryza meridionalis OMERI05G09060 N 0.000
ONIVA05G11160 Oryza nivara ONIVA05G11160 N 0.000
OPUNC05G08960 Oryza punctata OPUNC05G08960 N 0.000
ORGLA05G0093200 Oryza glaberrima ORGLA05G0093200 N 0.000
ORUFI05G11630 Oryza rufipogon ORUFI05G11630 N 0.000