myod2 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000014891 T037910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV

BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.881 0.904
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG

CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.881 0.904
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV

BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.881 0.904
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR

YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.881 0.904
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN

NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.881 0.904
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN

NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.881 0.904
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB

VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.881 0.904
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB

VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.881 0.904
MYOD1
M09839_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.881 0.904
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY

RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.881 0.904
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV

BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.881 0.904
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR

YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.881 0.904
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV

BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.881 0.904
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR

YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.881 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000038053 bHLH 99 150
ENSTRUP00000038054 bHLH 97 148
ENSTRUP00000038055 bHLH 80 131
ENSTRUP00000038056 bHLH 97 148

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action