CLOCK (Tursiops truncatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTTRG00000000960 T037978_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Clock
M01735_2.00
Mus musculus
NNCAYRTGNN

NNCAYRTGNN
PBM
Weirauch et al.(2014)
pTH5056
0.914 1.000
CLOCK
M02789_2.00
Homo sapiens
DACACGTGYH

DRCACGTGTH
SELEX
Jolma et al.(2013)
CLOCK_1
0.914 1.000
CLOCK
M04129_2.00
Homo sapiens
NMCACGTGYN

NRCACGTGKN
SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX
0.914 1.000
CLOCK
M08728_2.00
Homo sapiens
DBBBCAYKTGNNHB

VDNNCAMRTGVVVH
Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C
0.914 1.000
Clock
M08760_2.00
Mus musculus
DBBBCAYKTGNNHB

VDNNCAMRTGVVVH
Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C
0.914 1.000
Clock
M09473_2.00
Mus musculus
CACGTGNN

NNCACGTG
Misc
Heinz et al.(2010)
Liver-Clock_GSE39860
0.914 1.000
CLOCK
M09849_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CLOCK_Q6
0.914 1.000
CLOCK
M04130_2.00
Homo sapiens
NRCRCRTGBH

DVCAYGYGYN
SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000000904 bHLH 35 85

Links

Other bHLH family TFs
Other Tursiops truncatus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATEG_10299 Aspergillus terreus CADATEAG00003555 N 0.000
COCCADRAFT_110278 Bipolaris zeicola COCCADRAFT_110278 N 0.000
COCMIDRAFT_10017 Bipolaris oryzae COCMIDRAFT_10017 N 0.000
e_gw1.13.529.1 Mycosphaerella graminicola e_gw1.13.529.1 N 0.000
fgenesh1_pg.00086_#_186 Aspergillus carbonarius fgenesh1_pg.00086_#_186 N 0.000
LEMA_P021610.1 Leptosphaeria maculans LEMA_P021610.1 N 0.000
PTRG_11540 Pyrenophora triticirepentis PTRG_11540 N 0.000
SNOG_09436 Stagonospora nodorum SNOG_09436 N 0.000
U727_00434050161 Penicillium solitum U727_00434050161 N 0.000