ENSXMAG00000002200 (Xiphophorus maculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSXMAG00000002200 T038096_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN

NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.914 0.981
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN

NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.914 0.981
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH

DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.914 0.981
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY

RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.914 0.981
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB

VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.914 0.981
MITF
M09880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.914 0.981
MITF
M09881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.914 0.981
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN

NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.914 0.963
Tfe3
M05833_2.00
Mus musculus
CACGTGAY

RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.914 0.963
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.914 0.963
Tfe3
M09884_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.914 0.963
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY

RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.871 0.944
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.871 0.944
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.871 0.944
TFE3
M09790_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.871 0.944
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB

VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.871 0.944
Tfec
M00755_2.00
Mus musculus
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2013)
pTH2885
0.870 0.926
Tfec
M01736_2.00
Mus musculus
NCNCRTGVYN

NRBCAYGNGN
PBM
Weirauch et al.(2014)
pTH5065
0.870 0.926
TFEC
M02778_2.00
Homo sapiens
RNCACRTGAB

VTCAYGTGNY
SELEX
Jolma et al.(2013)
TFEC_1
0.870 0.907
TFEC
M04078_2.00
Homo sapiens
NVCACGTGACN

NGTCACGTGBN
SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX
0.870 0.907
TFEC
M04079_2.00
Homo sapiens
VNCATGTGAYN

NRTCACATGNB
SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX
0.870 0.907
Tfeb
M01728_2.00
Mus musculus
CWCGTGAY

RTCACGWG
PBM
Weirauch et al.(2014)
pTH5072
0.855 0.907
TFEB
M02781_2.00
Homo sapiens
RNCACGTGAY

RTCACGTGNY
SELEX
Jolma et al.(2013)
TFEB_1
0.855 0.907
TFEB
M02727_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2010)
TFEB_dimer
0.855 0.907
TFEB
M04088_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX
0.855 0.907
TFEB
M08718_2.00
Homo sapiens
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C
0.855 0.907
Tfeb
M08753_2.00
Mus musculus
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C
0.855 0.907
TFEB
M04089_2.00
Homo sapiens
VNCATGTGAYN

NRTCACATGNB
SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX
0.855 0.907
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000002204 bHLH 181 234

Links

Other bHLH family TFs
Other Xiphophorus maculatus TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action