CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HLH54F
(
Drosophila melanogaster
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0022740
T038422_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables protein heterodimerization activity. Involved in positive regulation of transcription by RNA polymerase II and visceral muscle development. Predicted to be located in nucleus. Is expressed in several structures, including embryonic/larval hypodermal muscle cell; extended germ band embryo; mesoderm anlage; ring gland; and visceral muscle primordium. Orthologous to several human genes including MSC (musculin). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLH54F
M05971_2.00
Drosophila melanogaster
MMCACCTGYYV
BRRCAGGTGKK
B1H
Zhu et al.(2011)
HLH54F_da_SANGER_5_FBgn0022740
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0088516
bHLH
32
83
QRNAANARERMRMRVLSSAYGRLKTKLPNIPPDTKLSKLDTLRLATLYIKQL
Links
Other
bHLH
family TFs
Other
Drosophila melanogaster
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy