CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA19636
(
Drosophila pseudoobscura
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0079632
T038487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
h
M03594_2.00
Drosophila melanogaster
YGSCACGCGMMW
WKKCGCGTGSCR
SELEX
Nitta et al.(2015)
h_1
0.914
1.000
h
M06463_2.00
Drosophila melanogaster
GBCRCGYGVC
GBCRCGYGVC
B1H
Mathelier et al.(2014)
MA0449.1
0.914
1.000
h
M05935_2.00
Drosophila melanogaster
GGCRCGYGNC
GNCRCGYGCC
B1H
Zhu et al.(2011)
h_NAR_FBgn0001168
0.914
1.000
h
M05936_2.00
Drosophila melanogaster
GSCACGYGMC
GKCRCGTGSC
B1H
Zhu et al.(2011)
h_SANGER_5_FBgn0001168
0.914
1.000
h
M09656_2.00
Drosophila melanogaster
GVCACGCGHC
GDCGCGTGBC
Misc
Kulakovskiy et al.(2009)
h
0.914
1.000
h
M09891_2.00
Drosophila melanogaster
NNBVCACGCGVSHN
NDSBCGCGTGBVNN
Transfac
Matys et al.(2006)
I$HAIRY_01
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0285970
bHLH
41
98
RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQ
Links
Other
bHLH
family TFs
Other
Drosophila pseudoobscura
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy