CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_7001730
(
Arabidopsis lyrata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
fgenesh1_pm.C_scaffold_7001730
T039097_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_7001730
bHLH
12
64
RSVDRKTIEKNRRMQMKSLYSELISLLPHQSSREPLTLPDELDEAANYIKKLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis lyrata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH162
Arabidopsis thaliana
AT4G20970
N
0.914
Bostr.10689s0049
Boechera stricta
Bostr.10689s0049
N
0.902
SapurV1A.0032s0260
Salix purpurea
SapurV1A.0032s0260
N
0.855
Thhalv10026322m.g
Eutrema salsugineum
Thhalv10026322m.g
N
0.840
Bra038792
Brassica rapa
Bra038792
N
0.840