bHLH34 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.3__2536__AT3G23210.1 T039124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH34
M01704_2.00
Arabidopsis thaliana
VCACGYGH

DCRCGTGB
PBM
Weirauch et al.(2014)
pTH7212
0.914 0.980
BHLH34
M06734_2.00
Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN

NGDCACGTGBNNNNHNNDNNN
Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a
0.914 0.980
BHLH34
M06735_2.00
Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN

NNNNNNNNVCACGTGNNNNNYWY
Dap-seq
OMalley et al.(2016)
bHLH34_col
0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2536__AT3G23210.1 bHLH 162 212

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.851
BHLH34 Arabidopsis thaliana AT3G23210 D 0.914
Bostr.19424s0322 Boechera stricta Bostr.19424s0322 I 0.840
Bo4g126940 Brassica oleracea Bo4g126940 I 0.856
Thhalv10021177m.g Eutrema salsugineum Thhalv10021177m.g I 0.859
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.844
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.878
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.844
mgf012088m Mimulus guttatus mgf012088m I 0.844
SELMODRAFT_405883 Selaginella moellendorffii SELMODRAFT_405883 I 0.845
SELMODRAFT_431241 Selaginella moellendorffii SELMODRAFT_431241 I 0.845
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.844
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.883
PGSC0003DMG400014432 Solanum tuberosum PGSC0003DMG400014432 I 0.876
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.879
TCM_020866 Theobroma cacao TCM_020866 I 0.843
VIT_14s0081g00720 Vitis vinifera VIT_14s0081g00720 I 0.884