TT8 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.6__2968__AT4G09820.1 T039151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.853 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2968__AT4G09820.1 bHLH 361 409

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.914
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.914
TT8 Arabidopsis thaliana AT4G09820 I 0.914
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.914
Bra037887 Brassica rapa Bra037887 N 0.887
Bo9g086920 Brassica oleracea Bo9g086920 N 0.887
Bo9g086910 Brassica oleracea Bo9g086910 N 0.887
SELMODRAFT_87033 Selaginella moellendorffii SELMODRAFT_87033 N 0.867
SELMODRAFT_73360 Selaginella moellendorffii SELMODRAFT_73360 N 0.867
ONIVA07G05400 Oryza nivara ONIVA07G05400 I 0.856
OMERI07G05880 Oryza meridionalis OMERI07G05880 I 0.856
OBART07G07130 Oryza barthii OBART07G07130 I 0.856
LPERR07G06180 Leersia perrieri LPERR07G06180 I 0.856
29647.m002101 Ricinus communis 29647.m002101 I 0.853
Ca_07836 Cicer arietinum Ca_07836 I 0.853
Pm020164 Prunus mume Pm020164 I 0.853
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I 0.853
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I 0.853
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I 0.853
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I 0.853
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I 0.853
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I 0.853
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I 0.853
PK09702.1 Cannabis sativa PK09702.1 D 0.853
MDP0000617077 Malus domestica MDP0000617077 I 0.853
MDP0000225680 Malus domestica MDP0000225680 I 0.853
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I 0.853
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I 0.853
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I 0.853
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I 0.853
TT8 Vitis vinifera VIT_07s0104g00090 I 0.853
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I 0.853
MTR_1g072320 Medicago truncatula MTR_1g072320 I 0.853
GLYMA02G16670 Glycine max GLYMA02G16670 I 0.853
GLYMA10G03140 Glycine max GLYMA10G03140 I 0.853
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I 0.853
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I 0.853
TCM_004403 Theobroma cacao TCM_004403 I 0.853
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I 0.853
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I 0.853
Si029106m.g Setaria italica Si029106m.g I 0.853
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I 0.853
Sb02g006390 Sorghum bicolor Sb02g006390 I 0.853
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I 0.853
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.844
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.844
Pm023805 Prunus mume Pm023805 I 0.844
Bra025508 Brassica rapa Bra025508 I 0.842
GL3 Arabidopsis thaliana AT5G41315 I 0.842
BHLH2 Arabidopsis thaliana AT1G63650 N 0.842
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.842
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.842
Bo4g141990 Brassica oleracea Bo4g141990 I 0.842
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.842
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.842
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.842
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.842
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.842
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.842
GLYMA19G33770 Glycine max GLYMA19G33770 I 0.840
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I 0.840