CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_00325
(
Gaeumannomyces graminis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GGTG_00325
T039403_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.889
0.909
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.884
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_00325T0
bHLH
287
361
KKTAHNMIEKRYRTNLNDKIAALRDSVPSLRIMSKSARGEDTTEDREELHGLTPAHKLNKATVLSKATEYIRHLE
Links
Other
bHLH
family TFs
Other
Gaeumannomyces graminis
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00007p00268460
Amborella trichopoda
AMTR_s00007p00268460
I
0.000
ORUFI06G06480
Oryza rufipogon
ORUFI06G06480
I
0.000
ORGLA06G0057200
Oryza glaberrima
ORGLA06G0057200
I
0.000
ONIVA06G07190
Oryza nivara
ONIVA06G07190
I
0.000
OMERI03G32210
Oryza meridionalis
OMERI03G32210
I
0.000
OGLUM06G06520
Oryza glumaepatula
OGLUM06G06520
I
0.000
OBART06G06190
Oryza barthii
OBART06G06190
I
0.000
BGIOSGA022471
Oryza indica
BGIOSGA022471
I
0.000
Ciclev10009827m.g
Citrus clementina
Ciclev10009827m.g
N
0.000
Eucgr.C00781
Eucalyptus grandis
Eucgr.C00781
N
0.000
Gorai.009G037000
Gossypium raimondii
Gorai.009G037000
N
0.000
orange1.1g032258m.g
Citrus sinensis
orange1.1g032258m.g
N
0.000
SapurV1A.0283s0190
Salix purpurea
SapurV1A.0283s0190
N
0.000
SapurV1A.0521s0060
Salix purpurea
SapurV1A.0521s0060
N
0.000
mgf017314m
Mimulus guttatus
mgf017314m
N
0.000
cassava10446.m1
Manihot esculenta
cassava10446.m1
N
0.000
29739.m003717
Ricinus communis
29739.m003717
N
0.000
VIT_11s0016g00670
Vitis vinifera
VIT_11s0016g00670
N
0.000
TCM_037487
Theobroma cacao
TCM_037487
N
0.000
POPTR_0018s00700
Populus trichocarpa
POPTR_0018s00700
N
0.000
PGSC0003DMG400023295
Solanum tuberosum
PGSC0003DMG400023295
N
0.000
GSMUA_Achr8G30520_001
Musa acuminata
GSMUA_Achr8G30520_001
N
0.000
SapurV1A.2946s0020
Salix purpurea
SapurV1A.2946s0020
N
0.000