GLYMA01G09010 (Glycine max)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GLYMA01G09010 T039455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8584
0.880 0.824
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.873 0.902
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN

NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.873 0.902
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV

BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.873 0.902
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.852 0.804
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.852 0.804
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.852 0.804
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.852 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G09010.5 bHLH 46 96
GLYMA01G09010.6 bHLH 46 96
GLYMA01G09010.7 bHLH 45 95
GLYMA01G09010.8 bHLH 45 95

Links

Other bHLH family TFs
Other Glycine max TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.903
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.903
Cla022382 Citrullus lanatus Cla022382 I 0.903
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.903
30138.m003899 Ricinus communis 30138.m003899 I 0.903
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.903
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.903
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.903
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.903
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.903
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.903
MDP0000261293 Malus domestica MDP0000261293 I 0.903
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.903
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.903
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.903
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.903
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.903
mgf013208m Mimulus guttatus mgf013208m I 0.903
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.903
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.903
PK01364.1 Cannabis sativa PK01364.1 I 0.901
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.901
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.890
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.883
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.883
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.883
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.883
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.883
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.883
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.883
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.883
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.883
TCM_014392 Theobroma cacao TCM_014392 I 0.883
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.883
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.883
GLYMA17G08980 Glycine max GLYMA17G08980 I 0.883
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.883
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.883
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.883
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.880
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.880
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.880
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.880
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.880
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.880
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.880
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.880
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.880
OS08G0490000 Oryza sativa OS08G0490000 I 0.880
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.880
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.880
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.880
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.880
OB08G25940 Oryza brachyantha OB08G25940 I 0.880
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.880
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.873
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.873
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.873
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.873
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.873
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.873
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I 0.873
29790.m000843 Ricinus communis 29790.m000843 I 0.873
Ca_22043 Cicer arietinum Ca_22043 I 0.873
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.873
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.873
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.873
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.873
TCM_019015 Theobroma cacao TCM_019015 I 0.873
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.873
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.873
mgf011829m Mimulus guttatus mgf011829m I 0.873
TCM_011433 Theobroma cacao TCM_011433 I 0.873
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.873
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.873
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.873
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.873
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.873
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.873
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.873
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.873
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.873
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.873
Bra038332 Brassica rapa Bra038332 I 0.873
PK00238.1 Cannabis sativa PK00238.1 I 0.873
Bra004355 Brassica rapa Bra004355 I 0.873
Bo2g062560 Brassica oleracea Bo2g062560 I 0.873
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.873
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.873
BIM2 Arabidopsis thaliana AT1G69010 D 0.873
Bo6g108530 Brassica oleracea Bo6g108530 I 0.873
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.870
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.870
30138.m003913 Ricinus communis 30138.m003913 I 0.859
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.858
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.858
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.858
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.858
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.856
F775_23096 Aegilops tauschii F775_23096 I 0.854
BGIOSGA030958 Oryza indica BGIOSGA030958 I 0.854
BRADI4G32967 Brachypodium distachyon BRADI4G32967 I 0.854
GRMZM2G009478 Zea mays GRMZM2G009478 I 0.854
OS09G0475400 Oryza sativa OS09G0475400 I 0.854
GRMZM2G089501 Zea mays GRMZM2G089501 I 0.854
ONIVA09G14370 Oryza nivara ONIVA09G14370 I 0.854
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I 0.854
Pavir.J04606 Panicum virgatum Pavir.J04606 I 0.854
OLONG_020060 Oryza longistaminata OLONG_020060 I 0.854
OPUNC09G12310 Oryza punctata OPUNC09G12310 I 0.854
Sb02g027460 Sorghum bicolor Sb02g027460 I 0.854
OMERI09G10560 Oryza meridionalis OMERI09G10560 I 0.854
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I 0.854
OBART09G13850 Oryza barthii OBART09G13850 I 0.854
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I 0.854
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I 0.854
LPERR09G10080 Leersia perrieri LPERR09G10080 I 0.854
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I 0.854
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I 0.854
Si029604m.g Setaria italica Si029604m.g I 0.854
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I 0.854
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.852
Bo2g161110 Brassica oleracea Bo2g161110 I 0.852
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.852
BIM1 Arabidopsis thaliana AT5G08130 D 0.852
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.852
Bo3g004690 Brassica oleracea Bo3g004690 I 0.852
PK10562.1 Cannabis sativa PK10562.1 I 0.852
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.852
Bra009322 Brassica rapa Bra009322 I 0.852
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.852
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.852
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.852
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.852
Bra029354 Brassica rapa Bra029354 I 0.852
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.852
mgf001137m Mimulus guttatus mgf001137m I 0.852
Bo5g020460 Brassica oleracea Bo5g020460 I 0.852
Bo9g174770 Brassica oleracea Bo9g174770 I 0.852
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.852
mgf005849m Mimulus guttatus mgf005849m I 0.852
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.850
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.850
Si013622m.g Setaria italica Si013622m.g I 0.850
Bra005969 Brassica rapa Bra005969 I 0.850
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.850
Lus10034358.g Linum usitatissimum Lus10034358.g I 0.849
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I 0.849
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I 0.849
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.847
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.847
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.847
Aquca_006_00387 Aquilegia coerulea Aquca_006_00387 I 0.846
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.845
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.845
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I 0.845
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.845
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.845
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.845
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.845
MTR_1g019240 Medicago truncatula MTR_1g019240 I 0.845
OBART06G04330 Oryza barthii OBART06G04330 I 0.845
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.845
Carubv10028570m.g Capsella rubella Carubv10028570m.g I 0.845
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I 0.845
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I 0.845
Bra012133 Brassica rapa Bra012133 I 0.845
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.845
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I 0.845
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.845
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I 0.845
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.845
Ca_19269 Cicer arietinum Ca_19269 I 0.845
ALC Arabidopsis thaliana AT5G67110 I 0.845
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.845
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.844
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.844
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.844
OB02G38020 Oryza brachyantha OB02G38020 I 0.844
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.844
Si016505m.g Setaria italica Si016505m.g I 0.844
OS02G0726700 Oryza sativa OS02G0726700 I 0.844
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.844
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.844
Cla018818 Citrullus lanatus Cla018818 I 0.841
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.840
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.840