GRMZM2G009478 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G009478 T039812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8584
0.885 0.863
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.855 0.863
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.855 0.863
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.855 0.863
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.855 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G009478_P01 bHLH 232 282
GRMZM2G009478_P02 bHLH 232 282
GRMZM2G009478_P03 bHLH 56 106
GRMZM2G009478_P04 bHLH 55 105
GRMZM2G009478_P05 bHLH 55 105
GRMZM2G009478_P06 bHLH 55 105

Links

Other bHLH family TFs
Other Zea mays TFs

Invalid Input OrderBy

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action