CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G016039
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM2G016039
T039816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.858
0.776
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G016039_P01
bHLH
83
131
LKSHSEAERRRRERINAHLATLRTMVPCSDKMDKAAVLAEVITHVKKLK
GRMZM2G016039_P02
bHLH
83
162
LKSHSEAERRRRERINAHLATLRTMVPCSDKAPTRWRRGVGCTSAPGSGYRSTAGEDDAAWHCSKLGHRLSVETGPKPSR
GRMZM2G016039_P03
bHLH
83
129
LKSHSEAERRRRERINAHLATLRTMVPCSDKVSASVSLSCSLSVVTC
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy