CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G088443
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM2G088443
T039869_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.839
0.776
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G088443_P01
bHLH
74
122
LKVHSEAERRRRERINAHLATLRRMVPDTRQMDKATLLARVVEQVKLLK
GRMZM2G088443_P02
bHLH
74
105
LKVHSEAERRRRERINAHLATLRRMVPDTRQV
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ca01107
Panicum virgatum
Pavir.Ca01107
I
0.914
Si002655m.g
Setaria italica
Si002655m.g
I
0.914
Pavir.Ea00439
Panicum virgatum
Pavir.Ea00439
I
0.914
BRADI2G03830
Brachypodium distachyon
BRADI2G03830
I
0.914
ORUFI01G04050
Oryza rufipogon
ORUFI01G04050
N
0.912
OGLUM01G04250
Oryza glumaepatula
OGLUM01G04250
N
0.912
BGIOSGA002833
Oryza indica
BGIOSGA002833
N
0.912
ORGLA01G0034700
Oryza glaberrima
ORGLA01G0034700
N
0.912
ONIVA01G04390
Oryza nivara
ONIVA01G04390
N
0.912
OBART01G03950
Oryza barthii
OBART01G03950
N
0.912
OMERI01G03850
Oryza meridionalis
OMERI01G03850
N
0.912
Sb03g005250
Sorghum bicolor
Sb03g005250
N
0.912
Si012213m.g
Setaria italica
Si012213m.g
N
0.912
Pavir.J32610
Panicum virgatum
Pavir.J32610
N
0.912
OPUNC01G03610
Oryza punctata
OPUNC01G03610
N
0.912
OB01G13800
Oryza brachyantha
OB01G13800
N
0.912
GRMZM2G369629
Zea mays
GRMZM2G369629
N
0.912
LPERR01G03590
Leersia perrieri
LPERR01G03590
I
0.893
OPUNC05G04080
Oryza punctata
OPUNC05G04080
N
0.891
Sb09g004820
Sorghum bicolor
Sb09g004820
N
0.891
OS05G0163900
Oryza sativa
OS05G0163900
N
0.891
ORGLA05G0041400
Oryza glaberrima
ORGLA05G0041400
N
0.891
ORUFI05G04670
Oryza rufipogon
ORUFI05G04670
N
0.891
OBART05G04450
Oryza barthii
OBART05G04450
N
0.891
ONIVA05G04820
Oryza nivara
ONIVA05G04820
N
0.891
OGLUM05G04370
Oryza glumaepatula
OGLUM05G04370
N
0.891
LPERR05G03980
Leersia perrieri
LPERR05G03980
N
0.891
OMERI05G04410
Oryza meridionalis
OMERI05G04410
N
0.891
OLONG_015419
Oryza longistaminata
OLONG_015419
N
0.891
Traes_1BS_1F372BED3
Triticum aestivum
Traes_1BS_1F372BED3
N
0.870
Traes_1AS_96F0745A2
Triticum aestivum
Traes_1AS_96F0745A2
N
0.870
TRIUR3_12818
Triticum urartu
TRIUR3_12818
N
0.870
F775_01873
Aegilops tauschii
F775_01873
N
0.870
MLOC_69121
Hordeum vulgare
MLOC_69121
N
0.870
Traes_1DS_CD79239C8
Triticum aestivum
Traes_1DS_CD79239C8
N
0.870
BRADI2G34600
Brachypodium distachyon
BRADI2G34600
N
0.864
OB05G14140
Oryza brachyantha
OB05G14140
N
0.864
F775_00759
Aegilops tauschii
F775_00759
N
0.861
TRIUR3_21807
Triticum urartu
TRIUR3_21807
N
0.861
TRIUR3_07421
Triticum urartu
TRIUR3_07421
N
0.861
TRAES3BF130100030CFD_g
Triticum aestivum
TRAES3BF130100030CFD_g
N
0.861
Traes_3B_2DF1A6E5B
Triticum aestivum
Traes_3B_2DF1A6E5B
N
0.861
Gorai.011G034000
Gossypium raimondii
Gorai.011G034000
I
0.848
GSMUA_Achr5G29390_001
Musa acuminata
GSMUA_Achr5G29390_001
N
0.843
evm.TU.supercontig_21.7
Carica papaya
evm.TU.supercontig_21.7
N
0.841
PDK_20s1551661g004
Phoenix dactylifera
PDK_20s1551661g004
N
0.840
PK20225.1
Cannabis sativa
PK20225.1
D
0.839
orange1.1g024670m.g
Citrus sinensis
orange1.1g024670m.g
I
0.839
GLYMA07G32690
Glycine max
GLYMA07G32690
I
0.839
Lus10001885.g
Linum usitatissimum
Lus10001885.g
I
0.839
VIT_14s0068g01580
Vitis vinifera
VIT_14s0068g01580
I
0.839
cassava32077.m1
Manihot esculenta
cassava32077.m1
I
0.839
Ciclev10016289m.g
Citrus clementina
Ciclev10016289m.g
I
0.839
evm.TU.supercontig_7.53
Carica papaya
evm.TU.supercontig_7.53
I
0.839
MDP0000249969
Malus domestica
MDP0000249969
I
0.839