CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr11G17840_001
(
Musa acuminata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GSMUA_Achr11G17840_001
T040026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV
BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.890
0.938
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN
NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.879
0.958
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK
MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.879
0.958
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.879
0.938
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.879
0.938
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.879
0.917
OS01G0235700
M09894_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.879
0.875
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV
BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.852
0.646
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.846
0.583
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr11P17840_001
bHLH
291
338
LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAVSYINELR
Links
Other
bHLH
family TFs
Other
Musa acuminata
TFs
543 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_401669
Amanita muscaria
M378DRAFT_401669
N
0.000
BOTBODRAFT_25595
Botryobasidium botryosum
BOTBODRAFT_25595
N
0.000
GALMADRAFT_248753
Galerina marginata
GALMADRAFT_248753
N
0.000
GLOTRDRAFT_127510
Gloeophyllum trabeum
GLOTRDRAFT_127510
N
0.000
M413DRAFT_172756
Hebeloma cylindrosporum
M413DRAFT_172756
N
0.000
HYDPIDRAFT_42253
Hydnomerulius pinastri
HYDPIDRAFT_42253
N
0.000
JAAARDRAFT_37116
Jaapia argillacea
JAAARDRAFT_37116
N
0.000
K443DRAFT_107454
Laccaria amethystina
K443DRAFT_107454
N
0.000
K443DRAFT_676663
Laccaria amethystina
K443DRAFT_676663
N
0.000
K443DRAFT_92166
Laccaria amethystina
K443DRAFT_92166
N
0.000
LACBIDRAFT_313619
Laccaria bicolor
LACBIDRAFT_313619
N
0.000
LACBIDRAFT_304198
Laccaria bicolor
LACBIDRAFT_304198
N
0.000
LACBIDRAFT_303137
Laccaria bicolor
LACBIDRAFT_303137
N
0.000
LACBIDRAFT_303095
Laccaria bicolor
LACBIDRAFT_303095
N
0.000
LACBIDRAFT_299937
Laccaria bicolor
LACBIDRAFT_299937
N
0.000
PAXRUDRAFT_567209
Paxillus rubicundulus
PAXRUDRAFT_567209
N
0.000
PAXRUDRAFT_825895
Paxillus rubicundulus
PAXRUDRAFT_825895
N
0.000
PILCRDRAFT_823959
Piloderma croceum
PILCRDRAFT_823959
N
0.000
PISMIDRAFT_679110
Pisolithus microcarpus
PISMIDRAFT_679110
N
0.000
PISMIDRAFT_16314
Pisolithus microcarpus
PISMIDRAFT_16314
N
0.000
M404DRAFT_997965
Pisolithus tinctorius
M404DRAFT_997965
N
0.000
PLEOSDRAFT_1095820
Pleurotus ostreatus
PLEOSDRAFT_1095820
N
0.000
V565_052720
Rhizoctonia solani
V565_052720
N
0.000
SCHCODRAFT_257926
Schizophyllum commune
SCHCODRAFT_257926
N
0.000
SCLCIDRAFT_106570
Scleroderma citrinum
SCLCIDRAFT_106570
N
0.000
SCLCIDRAFT_1208064
Scleroderma citrinum
SCLCIDRAFT_1208064
N
0.000
SERLA73DRAFT_168168
Serpula lacrymans
SERLA73DRAFT_168168
N
0.000
CY34DRAFT_26021
Suillus luteus
CY34DRAFT_26021
N
0.000
CY34DRAFT_729847
Suillus luteus
CY34DRAFT_729847
N
0.000