GSMUA_Achr6G30080_001 (Musa acuminata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GSMUA_Achr6G30080_001 T040162_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.898 0.920
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH

DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.898 0.920
PIF1
M09783_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.898 0.920
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV

BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.881 0.880
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.871 0.880
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.871 0.880
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.871 0.880
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.871 0.880
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.871 0.880
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.871 0.880
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS

SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.868 0.860
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV

BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.868 0.860
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.860 0.840
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.854 0.640
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.854 0.600
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P30080_001 bHLH 238 287

Links

Other bHLH family TFs
Other Musa acuminata TFs

491 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013214 Ailuropoda melanoleuca ENSAMEG00000013214 I 0.000
ENSP00000300057-D1 Bos grunniens ENSP00000300057-D1 I 0.000
MESP2 Bos taurus ENSBTAG00000027058 I 0.000
MESP1 Canis familiaris ENSCAFG00000030023 I 0.000
MESP2 Cavia porcellus ENSCPOG00000019717 I 0.000
ENSCSAG00000017134 Chlorocebus sabaeus ENSCSAG00000017134 I 0.000
MESP2 Dasypus novemcinctus ENSDNOG00000037045 I 0.000
MESP1 Felis catus ENSFCAG00000008973 I 0.000
MESP1 Gorilla gorilla ENSGGOG00000014946 I 0.000
MESP1 Homo sapiens ENSG00000166823 D 0.000
ENSSTOG00000025753 Ictidomys tridecemlineatus ENSSTOG00000025753 I 0.000
MESP1 Loxodonta africana ENSLAFG00000022195 I 0.000
MESP1 Macaca mulatta ENSMMUG00000010586 I 0.000
Mesp2 Mus musculus ENSMUSG00000030543 I 0.000
ENSPPYG00000006771 Pongo abelii ENSPPYG00000006771 I 0.000
ENSPPYG00000006864 Pongo abelii ENSPPYG00000006864 I 0.000
MESP1 Procavia capensis ENSPCAG00000008272 I 0.000
MESP1 Pteropus vampyrus ENSPVAG00000010571 I 0.000
Mesp2 Rattus norvegicus ENSRNOG00000014925 I 0.000
MESP1 Sus scrofa ENSSSCG00000001847 I 0.000
MESP2 Sus scrofa ENSSSCG00000001848 I 0.000
MESP2 Tursiops truncatus ENSTTRG00000015545 I 0.000