GSMUA_Achr8G26460_001 (Musa acuminata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GSMUA_Achr8G26460_001 T040217_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.884 0.633
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.882 0.755
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.860 0.612
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.860 0.612
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.860 0.612
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.860 0.612
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.860 0.612
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.849 0.571
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840 0.612
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P26460_001 bHLH 154 202

Links

Other bHLH family TFs
Other Musa acuminata TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASIL2 Arabidopsis thaliana AT3G14180 D 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.000
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.000
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.000
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.000
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.000
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.000
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.000
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.000
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.000
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.000
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
MDP0000281471 Malus domestica MDP0000281471 I 0.000
MDP0000255104 Malus domestica MDP0000255104 I 0.000
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
29814.m000741 Ricinus communis 29814.m000741 I 0.000
29727.m000472 Ricinus communis 29727.m000472 I 0.000
Pm013209 Prunus mume Pm013209 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.000
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.000
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.000
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.000
Bra021536 Brassica rapa Bra021536 I 0.000
Bra021534 Brassica rapa Bra021534 I 0.000
Bo3g065930 Brassica oleracea Bo3g065930 I 0.000
Bo1g134590 Brassica oleracea Bo1g134590 I 0.000
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
Cla015773 Citrullus lanatus Cla015773 I 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.000
SELMODRAFT_68039 Selaginella moellendorffii SELMODRAFT_68039 I 0.000
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000