CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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HelroG66987
(
Helobdella robusta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
HelroG66987
T040387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB
VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.848
0.680
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD
HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.848
0.680
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY
RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.848
0.680
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN
NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.848
0.680
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY
RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.848
0.660
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB
VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.848
0.660
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY
RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.848
0.660
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH
DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.848
0.660
SREBF1
M09796_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.848
0.660
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB
VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.848
0.660
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC
GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.848
0.660
SREBF1
M09799_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.848
0.660
SREBF1
M09800_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.848
0.660
SREBF1
M09801_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.848
0.660
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY
RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.848
0.660
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY
RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.848
0.660
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY
RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.848
0.620
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH
DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.848
0.620
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP66987
bHLH
11
60
KSTHNAIEKRYRMSINDRIVELRELLAGKDSKLSKSAVLRKAIEYIRYLV
Links
Other
bHLH
family TFs
Other
Helobdella robusta
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10004108
Crassostrea gigas
CGI_10004108
I
0.872
HCOI02041100
Haemonchus contortus
HCOI02041100
I
0.866
HCOI01299300
Haemonchus contortus
HCOI01299300
I
0.866
ANCCEY_06558
Ancylostoma ceylanicum
ANCCEY_06558
I
0.866
NBR_0002173001
Nippostrongylus brasiliensis
NBR_0002173001
I
0.866
ANCCAN_02634
Ancylostoma caninum
ANCCAN_02634
I
0.866
DICVIV_05621
Dictyocaulus viviparus
DICVIV_05621
I
0.866
TELCIR_07862
Teladorsagia circumcincta
TELCIR_07862
I
0.866
NECAME_14255
Necator americanus
NECAME_14255
I
0.866
TELCIR_06021
Teladorsagia circumcincta
TELCIR_06021
I
0.866
KGM_21476
Danaus plexippus
KGM_21476
I
0.854
HMEL008680
Heliconius melpomene
HMEL008680
I
0.854
BGIBMGA001211
Bombyx mori
BGIBMGA001211
I
0.854
ENSPSIG00000005996
Pelodiscus sinensis
ENSPSIG00000005996
I
0.851
SREBP
Drosophila willistoni
FBgn0219495
I
0.848
SREBP
Drosophila virilis
FBgn0198580
I
0.848
SREBP
Drosophila yakuba
FBgn0236960
I
0.848
HLH106
Drosophila melanogaster
FBgn0261283
D
0.848
SREBP
Drosophila simulans
FBgn0186498
I
0.848
GB54953
Apis mellifera
GB54953
I
0.848
SREBP
Drosophila pseudoobscura
FBgn0081122
I
0.848
L798_14382
Zootermopsis nevadensis
L798_14382
I
0.848
ENSXMAG00000014774
Xiphophorus maculatus
ENSXMAG00000014774
I
0.848
ACYPI005432
Acyrthosiphon pisum
ACYPI005432
I
0.848
SREBP
Drosophila ananassae
FBgn0100584
I
0.848
SREBP
Drosophila erecta
FBgn0108291
I
0.848
SREBP
Drosophila persimilis
FBgn0153336
I
0.848
SREBP
Drosophila grimshawi
FBgn0122129
I
0.848
SREBP
Drosophila sechellia
FBgn0174544
I
0.848
tetur08g03870
Tetranychus urticae
tetur08g03870
I
0.848
Myotis_brandtii_SREBF1_10023215
Myotis brandtii
Myotis_brandtii_SREBF1_10023215
I
0.848
Hsal_02671--XP_396866.3_APIME
Harpegnathos saltator
Hsal_02671--XP_396866.3_APIME
I
0.848
Gfo_R006283
Geospiza fortis
Gfo_R006283
I
0.848
Ogr11708
Ophisaurus gracilis
Ogr11708
I
0.848
Pvit_05020
Pogona vitticeps
Pvit_05020
I
0.848
XP_002944649
Xenopus tropicalis
XP_002944649
I
0.848
srebf1
Xenopus tropicalis
XB-GENE-987572
I
0.848
ENSP00000348069
Macaca fascicularis
ENSP00000348069
I
0.848
Alligator_sinensis_CCG012315.1
Alligator sinensis
Alligator_sinensis_CCG012315.1
I
0.848
SINV16629
Solenopsis invicta
SINV16629
I
0.848
NV10553
Nasonia vitripennis
NV10553
I
0.848
MESCA001239
Megaselia scalaris
MESCA001239
I
0.848
SMAR011485
Strigamia maritima
SMAR011485
I
0.848
SREBF1
Taeniopygia guttata
ENSTGUG00000007313
I
0.848
Aan_R009070
Calypte anna
Aan_R009070
I
0.848
YQE_07365
Dendroctonus ponderosae
YQE_07365
I
0.848
LotgiG224211
Lottia gigantea
LotgiG224211
I
0.848
srebf1
Tetraodon nigroviridis
ENSTNIG00000011957
I
0.848
SREBF1
Homo sapiens
ENSG00000072310
D
0.848
SREBF1
Felis catus
ENSFCAG00000001983
I
0.848
ENSFALG00000013762
Ficedula albicollis
ENSFALG00000013762
I
0.848
SREBF1
Echinops telfairi
ENSETEG00000004179
I
0.848
srebf1
Gasterosteus aculeatus
ENSGACG00000012064
I
0.848
SREBF1
Gallus gallus
ENSGALG00000027188
I
0.848
SREBF1
Loxodonta africana
ENSLAFG00000021644
I
0.848
ENSLACG00000013149
Latimeria chalumnae
ENSLACG00000013149
I
0.848
ENSSTOG00000014939
Ictidomys tridecemlineatus
ENSSTOG00000014939
I
0.848
SREBF1
Equus caballus
ENSECAG00000019802
I
0.848
Srebf1
Dipodomys ordii
ENSDORG00000012333
I
0.848
SREBF1
Bos taurus
ENSBTAG00000007884
I
0.848
ENSAMXG00000009016
Astyanax mexicanus
ENSAMXG00000009016
I
0.848
ENSAMEG00000005129
Ailuropoda melanoleuca
ENSAMEG00000005129
I
0.848
SREBF1
Anolis carolinensis
ENSACAG00000001181
I
0.848
SREBF1
Canis familiaris
ENSCAFG00000018436
I
0.848
SREBF1
Callithrix jacchus
ENSCJAG00000008953
I
0.848
srebf1
Danio rerio
ENSDARG00000067607
I
0.848
ENSCSAG00000008412
Chlorocebus sabaeus
ENSCSAG00000008412
I
0.848
SREBF1
Cavia porcellus
ENSCPOG00000002439
I
0.848
ENSLOCG00000008766
Lepisosteus oculatus
ENSLOCG00000008766
I
0.848
SREBF1
Gorilla gorilla
ENSGGOG00000002713
I
0.848
SREBF1
Procavia capensis
ENSPCAG00000014903
I
0.848
ENSPANG00000023675
Papio anubis
ENSPANG00000023675
I
0.848
ENSMEUG00000001306
Macropus eugenii
ENSMEUG00000001306
I
0.848
srebf1
Oryzias latipes
ENSORLG00000009437
I
0.848
ENSPFOG00000010306
Poecilia formosa
ENSPFOG00000010306
I
0.848
ENSPPYG00000008037
Pongo abelii
ENSPPYG00000008037
I
0.848
Srebf1
Rattus norvegicus
ENSRNOG00000003463
I
0.848
ENSSHAG00000018607
Sarcophilus harrisii
ENSSHAG00000018607
I
0.848
ENSSSCG00000023124
Sus scrofa
ENSSSCG00000023124
I
0.848
SREBF1
Pteropus vampyrus
ENSPVAG00000005765
I
0.848
SREBF1
Ochotona princeps
ENSOPRG00000015069
I
0.848
ENSONIG00000002304
Oreochromis niloticus
ENSONIG00000002304
I
0.848
SREBF1
Monodelphis domestica
ENSMODG00000014074
I
0.848
SREBF1
Macaca mulatta
ENSMMUG00000023375
I
0.848
SREBF1
Microcebus murinus
ENSMICG00000012535
I
0.848
ENSMPUG00000000024
Mustela putorius furo
ENSMPUG00000000024
I
0.848
Srebf1
Mus musculus
ENSMUSG00000020538
D
0.848
ENSOARG00000001504
Ovis aries
ENSOARG00000001504
I
0.848
SREBF1
Otolemur garnettii
ENSOGAG00000002910
I
0.848
SREBF1
Ornithorhynchus anatinus
ENSOANG00000012278
I
0.848
ENSNLEG00000013625
Nomascus leucogenys
ENSNLEG00000013625
I
0.848
CJA17864
Caenorhabditis japonica
CJA17864
N
0.845
L898_g465
Steinernema monticolum
L898_g465
I
0.840
PPAI004928
Phlebotomus papatasi
PPAI004928
I
0.840
L596_g18997
Steinernema carpocapsae
L596_g18997
I
0.840
L893_g8503
Steinernema glaseri
L893_g8503
I
0.840
L889_g16826
Steinernema feltiae
L889_g16826
I
0.840
L892_g28061
Steinernema scapterisci
L892_g28061
I
0.840
Cmyd_10008393
Chelonia mydas
Cmyd_10008393
I
0.838