CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL010237
(
Heliconius melpomene
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
HMEL010237
T040438_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB
VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.838
0.913
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK
MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.838
0.913
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.838
0.913
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.838
0.913
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY
RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.838
0.913
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN
NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.838
0.913
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN
NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.838
0.913
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH
DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.838
0.913
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.838
0.913
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN
NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.838
0.891
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH
DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.838
0.891
NHLH2
M09878_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.838
0.891
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.838
0.891
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL010237-PA
bHLH
88
134
YRTAHATRERIRVEAFNSAFASLRRLLPTLPPDKKLSKIEILRLAIY
Links
Other
bHLH
family TFs
Other
Heliconius melpomene
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy