LotgiG66849 (Lottia gigantea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 LotgiG66849 T040905_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB

VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.890 0.865
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.890 0.865
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN

NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.890 0.865
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB

VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.890 0.865
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB

VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.890 0.865
Fer1
M03620_2.00
Drosophila melanogaster
VDCASCTGHY

RDCAGSTGHB
SELEX
Nitta et al.(2015)
Fer1_1
0.870 0.846
Fer1
M05990_2.00
Drosophila melanogaster
HVCASMTGWCV

BGWCAKSTGBD
B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475
0.870 0.846
Fer1
M05991_2.00
Drosophila melanogaster
WYRHCAGCTGACG

CGTCAGCTGDYRW
B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475
0.870 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP66849 bHLH 61 113

Links

Other bHLH family TFs
Other Lottia gigantea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
16771_YMR136W Saccharomyces paradoxus 16771_YMR136W N 0.000
18683_YMR136W Saccharomyces bayanus 18683_YMR136W N 0.000
AACERI_AaceriADR249W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR249W N 0.000
AGOS_ADR249W Ashbya gossypii AGOS_ADR249W N 0.000
AWRI1499_1045 Brettanomyces bruxellensis AWRI1499_1045 N 0.000
BBA_09560 Beauveria bassiana BBA_09560 I 0.000
BN7_5045 Wickerhamomyces ciferrii BN7_5045 N 0.000
CAGL0I00902g Candida glabrata CAGL0I00902g N 0.000
CAGL0L06776g Candida glabrata CAGL0L06776g N 0.000
CANTEDRAFT_91588 Candida tenuis CANTEDRAFT_91588 I 0.000
CaO19.1577 Candida albicans CaO19.1577 N 0.000
CaO19.9150 Candida albicans CaO19.9150 N 0.000
CD36_17070 Candida dubliniensis CD36_17070 N 0.000
CORT_0A05720 Candida orthopsilosis CORT_0A05720 N 0.000
CPAG_02095 Candida parapsilosis CPAG_02095 N 0.000
CTRG_01401 Candida tropicalis CTRG_01401 N 0.000
DACRYDRAFT_21118 Dacryopinax sp DACRYDRAFT_21118 N 0.000
DEHA2F25916g Debaryomyces hansenii DEHA2F25916g I 0.000
DEHA2G03432g Debaryomyces hansenii DEHA2G03432g N 0.000
Ecym_6060 Eremothecium cymbalariae Ecym_6060 N 0.000
EFA77753.1 Polysphondylium pallidum EFA77753.1 I 0.000
fgenesh1_pg.C_chr_4.1000285 Pichia stipitis fgenesh1_pg.C_chr_4.1000285 N 0.000
G210_5792 Candida maltosa G210_5792 N 0.000
GNLVRS01_PISO0C10914g Millerozyma farinosa GNLVRS01_PISO0C10914g N 0.000
GNLVRS01_PISO0D10981g Millerozyma farinosa GNLVRS01_PISO0D10981g N 0.000
GNLVRS01_PISO0M06766g Millerozyma farinosa GNLVRS01_PISO0M06766g I 0.000
GNLVRS01_PISO0N06899g Millerozyma farinosa GNLVRS01_PISO0N06899g I 0.000
HPODL_00130 Ogataea parapolymorpha HPODL_00130 N 0.000
HPODL_00641 Ogataea parapolymorpha HPODL_00641 N 0.000
JL09_g378 Pichia kudriavzevii JL09_g378 N 0.000
KAFR_0B05130 Kazachstania africana KAFR_0B05130 I 0.000
KAFR_0B05930 Kazachstania africana KAFR_0B05930 N 0.000
KLLA0_F09757g Kluyveromyces lactis KLLA0_F09757g N 0.000
KLLA0_F17116g Kluyveromyces lactis KLLA0_F17116g N 0.000
KLTH0E09548g Kluyveromyces thermotolerans KLTH0E09548g I 0.000
KLTH0E09548g Lachancea thermotolerans KLTH0E09548g I 0.000
Kpol_1041p26 Vanderwaltozyma polyspora Kpol_1041p26 N 0.000
Kpol_1046p6 Vanderwaltozyma polyspora Kpol_1046p6 N 0.000
KUCA_T00003418001 Kuraishia capsulata KUCA_T00003418001 I 0.000
Kwal_17849 Kluyveromyces waltii Kwal_17849 N 0.000
LALA0_S02e04632g Lachancea lanzarotensis LALA0_S02e04632g N 0.000
NCAS_0D01260 Naumovozyma castellii NCAS_0D01260 I 0.000
NDAI_0H02900 Naumovozyma dairenensis NDAI_0H02900 N 0.000
PAS_chr4_0271 Komagataella pastoris PAS_chr4_0271 N 0.000
PICST_31414 Scheffersomyces stipitis PICST_31414 N 0.000
PSEUBRA_SCAF18g04670 Pseudozyma brasiliensis PSEUBRA_SCAF18g04670 I 0.000
SAKL0E04862g Lachancea kluyveri SAKL0E04862g N 0.000
SKUD_182801 Saccharomyces kudriavzevii SKUD_182801 N 0.000
SPAPADRAFT_66267 Spathaspora passalidarum SPAPADRAFT_66267 N 0.000
SU7_0667 Saccharomyces arboricola SU7_0667 N 0.000
TBLA_0B09240 Tetrapisispora blattae TBLA_0B09240 N 0.000
TDEL_0G03430 Torulaspora delbrueckii TDEL_0G03430 N 0.000
TPHA_0G02130 Tetrapisispora phaffii TPHA_0G02130 N 0.000
XP_002493684.1 Pichia pastoris XP_002493684.1 N 0.000
GAT2 Saccharomyces cerevisiae YMR136W N 0.000
ZBAI_01897 Zygosaccharomyces bailii ZBAI_01897 N 0.000
ZBAI_04886 Zygosaccharomyces bailii ZBAI_04886 N 0.000
ZBAI_06445 Zygosaccharomyces bailii ZBAI_06445 N 0.000
ZYRO0A08536g Zygosaccharomyces rouxii ZYRO0A08536g N 0.000
ZYRO0E01738g Zygosaccharomyces rouxii ZYRO0E01738g N 0.000