CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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LPERR02G12290
(
Leersia perrieri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
LPERR02G12290
T040956_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.863
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR02G12290.1
bHLH
43
93
RKVQKADREKMRRDKLNEQFQELGGTLDPDRPRNDKATILGDAIQMLKDLT
LPERR02G12290.2
bHLH
43
93
RKVQKADREKMRRDKLNEQFQELGGTLDPDRPRNDKATILGDAIQMLKDLT
Links
Other
bHLH
family TFs
Other
Leersia perrieri
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy