CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR07G02450
(
Leersia perrieri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
LPERR07G02450
T041022_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV
BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.877
0.860
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS
SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.864
0.840
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.864
0.840
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR07G02450.1
bHLH
169
218
AAEVHNLSERRRRDRINDKLRALQELVPHCNKTDKASILDEAIEYLKSLQ
Links
Other
bHLH
family TFs
Other
Leersia perrieri
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA07G0023700
Oryza glaberrima
ORGLA07G0023700
I
0.894
ORUFI07G02530
Oryza rufipogon
ORUFI07G02530
I
0.894
ONIVA07G01070
Oryza nivara
ONIVA07G01070
I
0.894
OMERI07G01290
Oryza meridionalis
OMERI07G01290
I
0.894
OBART07G02670
Oryza barthii
OBART07G02670
I
0.894
OS07G0143200
Oryza sativa
OS07G0143200
I
0.894
BGIOSGA025137
Oryza indica
BGIOSGA025137
I
0.894
OB07G12160
Oryza brachyantha
OB07G12160
I
0.891
Traes_5AS_EBCEA6601
Triticum aestivum
Traes_5AS_EBCEA6601
I
0.882
MLOC_71592
Hordeum vulgare
MLOC_71592
I
0.882
Si030028m.g
Setaria italica
Si030028m.g
I
0.882
Pavir.Ba03888
Panicum virgatum
Pavir.Ba03888
I
0.882
Pavir.Bb00256
Panicum virgatum
Pavir.Bb00256
I
0.882
Sb02g002760
Sorghum bicolor
Sb02g002760
I
0.882
F775_17713
Aegilops tauschii
F775_17713
I
0.882
OPUNC07G02800
Oryza punctata
OPUNC07G02800
I
0.882
BGIOSGA013672
Oryza indica
BGIOSGA013672
I
0.880
OS03G0782500
Oryza sativa
OS03G0782500
I
0.880
ORUFI12G20600
Oryza rufipogon
ORUFI12G20600
I
0.880
LjSGA_030731.1
Lotus japonicus
LjSGA_030731.1
I
0.880
Pavir.Ia00490
Panicum virgatum
Pavir.Ia00490
I
0.880
OS12G0610200
Oryza sativa
OS12G0610200
I
0.880
POPTR_0005s22870
Populus trichocarpa
POPTR_0005s22870
I
0.880
POPTR_0002s05630
Populus trichocarpa
POPTR_0002s05630
I
0.880
PGSC0003DMG401015926
Solanum tuberosum
PGSC0003DMG401015926
I
0.880
BGIOSGA013197
Oryza indica
BGIOSGA013197
I
0.880
ORUFI03G28150
Oryza rufipogon
ORUFI03G28150
I
0.880
ORGLA12G0157200
Oryza glaberrima
ORGLA12G0157200
I
0.880
OPUNC03G24740
Oryza punctata
OPUNC03G24740
I
0.880
ONIVA12G17350
Oryza nivara
ONIVA12G17350
I
0.880
ONIVA10G12820
Oryza nivara
ONIVA10G12820
I
0.880
BGIOSGA037775
Oryza indica
BGIOSGA037775
I
0.880
OPUNC03G33340
Oryza punctata
OPUNC03G33340
I
0.880
OPUNC12G16660
Oryza punctata
OPUNC12G16660
I
0.880
Pavir.Ia01219
Panicum virgatum
Pavir.Ia01219
I
0.880
BGIOSGA037772
Oryza indica
BGIOSGA037772
I
0.880
ORGLA03G0333400
Oryza glaberrima
ORGLA03G0333400
I
0.880
PRUPE_ppa017228mg
Prunus persica
PRUPE_ppa017228mg
I
0.880
Sb01g006190
Sorghum bicolor
Sb01g006190
I
0.880
Traes_5BL_054434680
Triticum aestivum
Traes_5BL_054434680
I
0.880
PDK_20s1667271g001
Phoenix dactylifera
PDK_20s1667271g001
I
0.880
TCM_001913
Theobroma cacao
TCM_001913
I
0.880
Solyc07g043580.2
Solanum lycopersicum
Solyc07g043580.2
I
0.880
Traes_5DL_026913547
Triticum aestivum
Traes_5DL_026913547
I
0.880
Ca_21576
Cicer arietinum
Ca_21576
I
0.880
Pm014785
Prunus mume
Pm014785
I
0.880
Ciclev10031028m.g
Citrus clementina
Ciclev10031028m.g
I
0.880
Eucgr.A02043
Eucalyptus grandis
Eucgr.A02043
I
0.880
gene28785-v1.0-hybrid
Fragaria vesca
gene28785-v1.0-hybrid
I
0.880
Si035819m.g
Setaria italica
Si035819m.g
I
0.880
MDP0000254650
Malus domestica
MDP0000254650
I
0.880
orange1.1g007797m.g
Citrus sinensis
orange1.1g007797m.g
I
0.880
Sb08g021000
Sorghum bicolor
Sb08g021000
I
0.880
Sb01g013843
Sorghum bicolor
Sb01g013843
I
0.880
MDP0000198404
Malus domestica
MDP0000198404
I
0.880
Si022196m.g
Setaria italica
Si022196m.g
I
0.880
Gorai.006G008800
Gossypium raimondii
Gorai.006G008800
I
0.880
Si035110m.g
Setaria italica
Si035110m.g
I
0.880
PDK_20s1451901g001
Phoenix dactylifera
PDK_20s1451901g001
I
0.880
ONIVA03G28270
Oryza nivara
ONIVA03G28270
I
0.880
ORUFI03G37840
Oryza rufipogon
ORUFI03G37840
I
0.880
GSMUA_Achr6G31370_001
Musa acuminata
GSMUA_Achr6G31370_001
I
0.880
SapurV1A.0076s0230
Salix purpurea
SapurV1A.0076s0230
I
0.880
GSMUA_Achr5G02280_001
Musa acuminata
GSMUA_Achr5G02280_001
I
0.880
LPERR03G22450
Leersia perrieri
LPERR03G22450
I
0.880
Pavir.J12143
Panicum virgatum
Pavir.J12143
I
0.880
MLOC_7883
Hordeum vulgare
MLOC_7883
I
0.880
LPERR12G15470
Leersia perrieri
LPERR12G15470
I
0.880
OMERI12G13210
Oryza meridionalis
OMERI12G13210
I
0.880
GRMZM2G165042
Zea mays
GRMZM2G165042
I
0.880
PK12073.1
Cannabis sativa
PK12073.1
I
0.880
BRADI1G13980
Brachypodium distachyon
BRADI1G13980
I
0.880
F775_16112
Aegilops tauschii
F775_16112
I
0.880
GLYMA08G41620
Glycine max
GLYMA08G41620
I
0.880
GRMZM2G065374
Zea mays
GRMZM2G065374
I
0.880
GLYMA18G14530
Glycine max
GLYMA18G14530
I
0.880
MTR_3g449770
Medicago truncatula
MTR_3g449770
I
0.880
GSMUA_Achr4G31770_001
Musa acuminata
GSMUA_Achr4G31770_001
I
0.880
OGLUM03G36070
Oryza glumaepatula
OGLUM03G36070
I
0.880
OBART03G36360
Oryza barthii
OBART03G36360
I
0.880
Pavir.Ib04022
Panicum virgatum
Pavir.Ib04022
I
0.880
OB03G43250
Oryza brachyantha
OB03G43250
I
0.880
OGLUM03G27730
Oryza glumaepatula
OGLUM03G27730
I
0.880
OLONG_002577
Oryza longistaminata
OLONG_002577
I
0.880
OBART12G18470
Oryza barthii
OBART12G18470
I
0.880
Pavir.J08053
Panicum virgatum
Pavir.J08053
I
0.880
OGLUM12G20110
Oryza glumaepatula
OGLUM12G20110
I
0.880
Bra007430
Brassica rapa
Bra007430
I
0.877
Carubv10023275m.g
Capsella rubella
Carubv10023275m.g
I
0.877
Carubv10017267m.g
Capsella rubella
Carubv10017267m.g
I
0.877
Cagra.0216s0013
Capsella grandiflora
Cagra.0216s0013
I
0.877
PIF4
Arabidopsis lyrata
fgenesh2_kg.4__2461__AT2G43010.2
I
0.877
Thhalv10005929m.g
Eutrema salsugineum
Thhalv10005929m.g
I
0.877
Thhalv10016715m.g
Eutrema salsugineum
Thhalv10016715m.g
I
0.877
Bostr.20903s0139
Boechera stricta
Bostr.20903s0139
I
0.877
Bo3g036300
Brassica oleracea
Bo3g036300
I
0.877
Pavir.Cb00224
Panicum virgatum
Pavir.Cb00224
I
0.877
Bostr.25993s0478
Boechera stricta
Bostr.25993s0478
I
0.877
Cagra.0202s0011
Capsella grandiflora
Cagra.0202s0011
I
0.877
Bo8g093060
Brassica oleracea
Bo8g093060
I
0.877
PIL6
Arabidopsis lyrata
scaffold_503108.1
I
0.877
PIF4
Arabidopsis thaliana
AT2G43010
D
0.877
Traes_2BL_C594B831F
Triticum aestivum
Traes_2BL_C594B831F
I
0.869
F775_01586
Aegilops tauschii
F775_01586
I
0.869
BRADI1G58230
Brachypodium distachyon
BRADI1G58230
I
0.869
MLOC_77331
Hordeum vulgare
MLOC_77331
I
0.869
Traes_2AL_892B4448E
Triticum aestivum
Traes_2AL_892B4448E
I
0.869
TRIUR3_34817
Triticum urartu
TRIUR3_34817
I
0.869
Traes_2DL_A84C58DC2
Triticum aestivum
Traes_2DL_A84C58DC2
I
0.869
TRIUR3_14996
Triticum urartu
TRIUR3_14996
I
0.867
VIT_12s0028g01110
Vitis vinifera
VIT_12s0028g01110
I
0.867
PGSC0003DMG400014705
Solanum tuberosum
PGSC0003DMG400014705
I
0.867
Eucgr.K03592
Eucalyptus grandis
Eucgr.K03592
I
0.867
BRADI1G06670
Brachypodium distachyon
BRADI1G06670
I
0.867
Aquca_026_00376
Aquilegia coerulea
Aquca_026_00376
I
0.867
SapurV1A.0289s0130
Salix purpurea
SapurV1A.0289s0130
I
0.867
F775_31861
Aegilops tauschii
F775_31861
I
0.867
GRMZM5G865967
Zea mays
GRMZM5G865967
I
0.867
PIF5
Arabidopsis thaliana
AT3G59060
D
0.864
AMTR_s00039p00032460
Amborella trichopoda
AMTR_s00039p00032460
I
0.864
Bo4g108070
Brassica oleracea
Bo4g108070
I
0.864
SapurV1A.1016s0050
Salix purpurea
SapurV1A.1016s0050
I
0.857
Cucsa.058710
Cucumis sativus
Cucsa.058710
I
0.856
Cla023602
Citrullus lanatus
Cla023602
I
0.856
Bra037742
Brassica rapa
Bra037742
I
0.853
MDP0000288670
Malus domestica
MDP0000288670
I
0.852
PK15531.1
Cannabis sativa
PK15531.1
I
0.852
Pavir.Ia02188
Panicum virgatum
Pavir.Ia02188
I
0.852
Pavir.J18019
Panicum virgatum
Pavir.J18019
I
0.852
Gorai.001G078500
Gossypium raimondii
Gorai.001G078500
I
0.852
evm.TU.supercontig_1213.3
Carica papaya
evm.TU.supercontig_1213.3
I
0.852
gene26073-v1.0-hybrid
Fragaria vesca
gene26073-v1.0-hybrid
I
0.852
Eucgr.K02496
Eucalyptus grandis
Eucgr.K02496
I
0.852
PRUPE_ppa022963mg
Prunus persica
PRUPE_ppa022963mg
I
0.852
OBART10G18190
Oryza barthii
OBART10G18190
I
0.852
AMTR_s00106p00127480
Amborella trichopoda
AMTR_s00106p00127480
I
0.852
OB10G25310
Oryza brachyantha
OB10G25310
I
0.852
TCM_014141
Theobroma cacao
TCM_014141
I
0.852
Si035334m.g
Setaria italica
Si035334m.g
I
0.852
OPUNC10G16560
Oryza punctata
OPUNC10G16560
I
0.852
OS10G0556200
Oryza sativa
OS10G0556200
I
0.852
ORGLA10G0133200
Oryza glaberrima
ORGLA10G0133200
I
0.852
BRADI3G33170
Brachypodium distachyon
BRADI3G33170
I
0.852
Traes_1AL_914726769
Triticum aestivum
Traes_1AL_914726769
I
0.852
PIF7
Vitis vinifera
VIT_17s0000g06930
I
0.852
Cucsa.113040
Cucumis sativus
Cucsa.113040
I
0.852
GLYMA06G21495
Glycine max
GLYMA06G21495
I
0.852
30138.m004021
Ricinus communis
30138.m004021
I
0.852
cassava46185.m1
Manihot esculenta
cassava46185.m1
I
0.852
BGIOSGA031426
Oryza indica
BGIOSGA031426
I
0.852
Pm024836
Prunus mume
Pm024836
I
0.852
Cla018863
Citrullus lanatus
Cla018863
I
0.852
PGSC0003DMG400018950
Solanum tuberosum
PGSC0003DMG400018950
I
0.850
GLYMA02G45150
Glycine max
GLYMA02G45150
I
0.850
SELMODRAFT_114141
Selaginella moellendorffii
SELMODRAFT_114141
I
0.850
GLYMA14G03600
Glycine max
GLYMA14G03600
I
0.850
GSMUA_Achr6G30080_001
Musa acuminata
GSMUA_Achr6G30080_001
I
0.850
Lus10029805.g
Linum usitatissimum
Lus10029805.g
I
0.850
Cucsa.078700
Cucumis sativus
Cucsa.078700
I
0.850
Cla015231
Citrullus lanatus
Cla015231
I
0.850
e_gw1.84.236.1
Physcomitrella patens
e_gw1.84.236.1
I
0.850
estExt_fgenesh1_pg.C_680048
Physcomitrella patens
estExt_fgenesh1_pg.C_680048
I
0.850
gw1.147.92.1
Physcomitrella patens
gw1.147.92.1
I
0.850
SELMODRAFT_116654
Selaginella moellendorffii
SELMODRAFT_116654
I
0.850
Solyc09g063010.2
Solanum lycopersicum
Solyc09g063010.2
I
0.850
SELMODRAFT_118904
Selaginella moellendorffii
SELMODRAFT_118904
I
0.850
Lus10020727.g
Linum usitatissimum
Lus10020727.g
I
0.850
estExt_fgenesh1_pg.C_690022
Physcomitrella patens
estExt_fgenesh1_pg.C_690022
I
0.850
PGSC0003DMG400024554
Solanum tuberosum
PGSC0003DMG400024554
I
0.849
AMTR_s00110p00030150
Amborella trichopoda
AMTR_s00110p00030150
I
0.849
GSMUA_Achr8G11070_001
Musa acuminata
GSMUA_Achr8G11070_001
I
0.849
Solyc03g115540.1
Solanum lycopersicum
Solyc03g115540.1
I
0.849
Bra000283
Brassica rapa
Bra000283
I
0.846
SELMODRAFT_29179
Selaginella moellendorffii
SELMODRAFT_29179
I
0.846
SELMODRAFT_39143
Selaginella moellendorffii
SELMODRAFT_39143
I
0.846
GSMUA_Achr3G04630_001
Musa acuminata
GSMUA_Achr3G04630_001
I
0.845
Solyc06g069600.1
Solanum lycopersicum
Solyc06g069600.1
I
0.839
LPERR10G14070
Leersia perrieri
LPERR10G14070
I
0.839