CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR07G06180
(
Leersia perrieri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
LPERR07G06180
T041025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV
BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.911
0.918
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR07G06180.1
bHLH
461
509
SGNHVMKERRRREKLNEKFIILRSLVPFMTKMDKASILGDTIEYVKQLR
Links
Other
bHLH
family TFs
Other
Leersia perrieri
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART07G07130
Oryza barthii
OBART07G07130
I
0.914
ONIVA07G05400
Oryza nivara
ONIVA07G05400
I
0.914
OMERI07G05880
Oryza meridionalis
OMERI07G05880
I
0.914
Sb02g006390
Sorghum bicolor
Sb02g006390
I
0.911
MTR_1g072320
Medicago truncatula
MTR_1g072320
I
0.911
Gorai.004G215900
Gossypium raimondii
Gorai.004G215900
I
0.911
cassava24625.valid.m1
Manihot esculenta
cassava24625.valid.m1
I
0.911
cassava29522.valid.m1
Manihot esculenta
cassava29522.valid.m1
I
0.911
MDP0000617077
Malus domestica
MDP0000617077
I
0.911
MDP0000225680
Malus domestica
MDP0000225680
I
0.911
29647.m002101
Ricinus communis
29647.m002101
I
0.911
Pm020164
Prunus mume
Pm020164
I
0.911
Ca_07836
Cicer arietinum
Ca_07836
I
0.911
TT8
Vitis vinifera
VIT_07s0104g00090
I
0.911
PRUPE_ppa002884m2g
Prunus persica
PRUPE_ppa002884m2g
I
0.911
gene27827-v1.0-hybrid
Fragaria vesca
gene27827-v1.0-hybrid
I
0.911
Si029106m.g
Setaria italica
Si029106m.g
I
0.911
PGSC0003DMG400012891
Solanum tuberosum
PGSC0003DMG400012891
I
0.911
POPTR_0005s23020
Populus trichocarpa
POPTR_0005s23020
I
0.911
GSMUA_Achr6G21490_001
Musa acuminata
GSMUA_Achr6G21490_001
I
0.911
BRADI1G54070
Brachypodium distachyon
BRADI1G54070
I
0.911
Aquca_054_00130
Aquilegia coerulea
Aquca_054_00130
I
0.911
SapurV1A.0076s0350
Salix purpurea
SapurV1A.0076s0350
I
0.911
Eucgr.H01487
Eucalyptus grandis
Eucgr.H01487
I
0.911
Ciclev10019118m.g
Citrus clementina
Ciclev10019118m.g
I
0.911
PK09702.1
Cannabis sativa
PK09702.1
D
0.911
AMTR_s00025p00048410
Amborella trichopoda
AMTR_s00025p00048410
I
0.911
Thhalv10028584m.g
Eutrema salsugineum
Thhalv10028584m.g
I
0.911
GLYMA02G16670
Glycine max
GLYMA02G16670
I
0.911
GLYMA10G03140
Glycine max
GLYMA10G03140
I
0.911
Solyc09g065100.1
Solanum lycopersicum
Solyc09g065100.1
I
0.911
TCM_004403
Theobroma cacao
TCM_004403
I
0.911
orange1.1g037798m.g
Citrus sinensis
orange1.1g037798m.g
I
0.911
Gorai.007G136400
Gossypium raimondii
Gorai.007G136400
I
0.911
GSMUA_Achr3G17620_001
Musa acuminata
GSMUA_Achr3G17620_001
I
0.898
POPTR_0002s05510
Populus trichocarpa
POPTR_0002s05510
I
0.887
Traes_1AS_4DA31F550
Triticum aestivum
Traes_1AS_4DA31F550
I
0.887
MLOC_6900
Hordeum vulgare
MLOC_6900
I
0.887
evm.TU.supercontig_52.26
Carica papaya
evm.TU.supercontig_52.26
I
0.887
SapurV1A.0289s0260
Salix purpurea
SapurV1A.0289s0260
I
0.887
GLYMA03G30940
Glycine max
GLYMA03G30940
I
0.868
Gorai.006G216700
Gossypium raimondii
Gorai.006G216700
I
0.864
Lus10000484.g
Linum usitatissimum
Lus10000484.g
I
0.864
Lus10004575.g
Linum usitatissimum
Lus10004575.g
I
0.864
Lus10004574.g
Linum usitatissimum
Lus10004574.g
I
0.864
Cucsa.313090
Cucumis sativus
Cucsa.313090
I
0.861
evm.TU.supercontig_71.72
Carica papaya
evm.TU.supercontig_71.72
I
0.861
cassava8764.m1
Manihot esculenta
cassava8764.m1
I
0.861
Aquca_026_00421
Aquilegia coerulea
Aquca_026_00421
I
0.861
29827.m002528
Ricinus communis
29827.m002528
I
0.861
Cla016454
Citrullus lanatus
Cla016454
I
0.861
AMTR_s00002p00225810
Amborella trichopoda
AMTR_s00002p00225810
I
0.861
VIT_02s0012g01320
Vitis vinifera
VIT_02s0012g01320
I
0.861
cassava45205.m1
Manihot esculenta
cassava45205.m1
I
0.861
ORGLA10G0146100
Oryza glaberrima
ORGLA10G0146100
I
0.861
Pavir.J28686
Panicum virgatum
Pavir.J28686
I
0.861
Pavir.Ia03512
Panicum virgatum
Pavir.Ia03512
I
0.861
orange1.1g005651m.g
Citrus sinensis
orange1.1g005651m.g
I
0.861
Lus10030970.g
Linum usitatissimum
Lus10030970.g
I
0.861
GRMZM2G049229
Zea mays
GRMZM2G049229
I
0.861
GRMZM2G001930
Zea mays
GRMZM2G001930
I
0.861
BGIOSGA033493
Oryza indica
BGIOSGA033493
I
0.861
SapurV1A.0741s0050
Salix purpurea
SapurV1A.0741s0050
I
0.861
BRADI3G34200
Brachypodium distachyon
BRADI3G34200
I
0.861
Pavir.J38781
Panicum virgatum
Pavir.J38781
I
0.861
LPERR10G15300
Leersia perrieri
LPERR10G15300
I
0.861
MLOC_71611
Hordeum vulgare
MLOC_71611
I
0.861
MYC2
Oryza sativa
OS10G0575000
I
0.861
POPTR_0001s02450
Populus trichocarpa
POPTR_0001s02450
I
0.861
Sb01g028230
Sorghum bicolor
Sb01g028230
I
0.861
Si039973m.g
Setaria italica
Si039973m.g
I
0.861
ORUFI10G20700
Oryza rufipogon
ORUFI10G20700
I
0.861
Ciclev10011214m.g
Citrus clementina
Ciclev10011214m.g
I
0.861
OGLUM10G19510
Oryza glumaepatula
OGLUM10G19510
I
0.861
OLONG_011820
Oryza longistaminata
OLONG_011820
I
0.861
ONIVA10G22030
Oryza nivara
ONIVA10G22030
I
0.861
OPUNC10G17860
Oryza punctata
OPUNC10G17860
I
0.861
TCM_015714
Theobroma cacao
TCM_015714
I
0.861
Traes_4DS_7F3D9E4D9
Triticum aestivum
Traes_4DS_7F3D9E4D9
I
0.857
MLOC_64735
Hordeum vulgare
MLOC_64735
I
0.857
PRUPE_ppa007561mg
Prunus persica
PRUPE_ppa007561mg
I
0.857
Pm002304
Prunus mume
Pm002304
I
0.857
TRIUR3_26880
Triticum urartu
TRIUR3_26880
I
0.857
BRADI1G10170
Brachypodium distachyon
BRADI1G10170
I
0.857
Traes_4BS_34AF89ACE
Triticum aestivum
Traes_4BS_34AF89ACE
I
0.857
F775_11371
Aegilops tauschii
F775_11371
I
0.857
Traes_4AL_F3571097B
Triticum aestivum
Traes_4AL_F3571097B
I
0.857
Carubv10002462m.g
Capsella rubella
Carubv10002462m.g
I
0.856
TT8
Arabidopsis lyrata
fgenesh2_kg.6__2968__AT4G09820.1
I
0.856
TT8
Arabidopsis thaliana
AT4G09820
I
0.856
Cagra.1664s0001
Capsella grandiflora
Cagra.1664s0001
I
0.856
Bostr.25463s0338
Boechera stricta
Bostr.25463s0338
I
0.856
mgf008560m
Mimulus guttatus
mgf008560m
I
0.855
Eucgr.H02385
Eucalyptus grandis
Eucgr.H02385
I
0.854
Gorai.004G129600
Gossypium raimondii
Gorai.004G129600
I
0.849
GSMUA_AchrUn_randomG02900_001
Musa acuminata
GSMUA_AchrUn_randomG02900_001
I
0.849
Eucgr.E01043
Eucalyptus grandis
Eucgr.E01043
I
0.849
GSMUA_Achr8G14720_001
Musa acuminata
GSMUA_Achr8G14720_001
I
0.849
GSMUA_Achr4G16980_001
Musa acuminata
GSMUA_Achr4G16980_001
I
0.849
GSMUA_Achr11G17840_001
Musa acuminata
GSMUA_Achr11G17840_001
I
0.849
GSMUA_Achr2G18140_001
Musa acuminata
GSMUA_Achr2G18140_001
I
0.849
GSMUA_Achr7G04720_001
Musa acuminata
GSMUA_Achr7G04720_001
I
0.849
PDK_20s1464821g001
Phoenix dactylifera
PDK_20s1464821g001
I
0.847
AMTR_s00009p00242790
Amborella trichopoda
AMTR_s00009p00242790
I
0.845
GSMUA_Achr11G21270_001
Musa acuminata
GSMUA_Achr11G21270_001
I
0.845
Lus10011578.g
Linum usitatissimum
Lus10011578.g
I
0.844
Lus10019247.g
Linum usitatissimum
Lus10019247.g
I
0.842
GLYMA19G33770
Glycine max
GLYMA19G33770
I
0.840
Lus10012457.g
Linum usitatissimum
Lus10012457.g
I
0.840
Gorai.004G184800
Gossypium raimondii
Gorai.004G184800
I
0.840
e_gw1.11.52.1
Physcomitrella patens
e_gw1.11.52.1
I
0.840
MTR_8g067280
Medicago truncatula
MTR_8g067280
I
0.840
Lus10018787.g
Linum usitatissimum
Lus10018787.g
I
0.840
Lus10020503.g
Linum usitatissimum
Lus10020503.g
I
0.840
Lus10024871.g
Linum usitatissimum
Lus10024871.g
I
0.840