MTR_0250s0040 (Medicago truncatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 MTR_0250s0040 T041567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.840 0.604
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.840 0.604
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.840 0.604
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.840 0.583
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.840 0.583
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH16277 bHLH 87 134

Links

Other bHLH family TFs
Other Medicago truncatula TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_6g047570 Medicago truncatula MTR_6g047570 I 0.914
MTR_6g047550 Medicago truncatula MTR_6g047550 I 0.914
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.840
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.840
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.840
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.840
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.840
mgf002775m Mimulus guttatus mgf002775m I 0.840
Ca_12352 Cicer arietinum Ca_12352 I 0.840
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.840
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.840
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.840
Ca_11514 Cicer arietinum Ca_11514 I 0.840
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.840
Pm023237 Prunus mume Pm023237 I 0.840
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.840
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.840
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.840
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.840
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.840
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.840
PK18474.1 Cannabis sativa PK18474.1 D 0.840
MDP0000136498 Malus domestica MDP0000136498 I 0.840
MDP0000029168 Malus domestica MDP0000029168 I 0.840
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.840
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.840
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.840
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.840
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.840
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.840
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.840
Bra010178 Brassica rapa Bra010178 I 0.840
Bo9g065530 Brassica oleracea Bo9g065530 I 0.840
Bra013263 Brassica rapa Bra013263 I 0.840
Bra017523 Brassica rapa Bra017523 I 0.840
Bra024998 Brassica rapa Bra024998 I 0.840
Bra017527 Brassica rapa Bra017527 I 0.840
Bo8g028850 Brassica oleracea Bo8g028850 I 0.840
Bo7g075710 Brassica oleracea Bo7g075710 I 0.840
MYC3 Arabidopsis thaliana AT5G46760 D 0.840
MYC4 Arabidopsis thaliana AT4G17880 D 0.840
Bo01130s010 Brassica oleracea Bo01130s010 I 0.840
Bo1g017990 Brassica oleracea Bo1g017990 I 0.840
Bo5g086990 Brassica oleracea Bo5g086990 I 0.840
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.840
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.840
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.840
MTR_4g067010 Medicago truncatula MTR_4g067010 I 0.840
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.840
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.840
MYC2 Arabidopsis thaliana AT1G32640 D 0.840
MTR_4g066460 Medicago truncatula MTR_4g066460 I 0.840
MTR_4g066380 Medicago truncatula MTR_4g066380 I 0.840
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.840
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.840
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.840
MTR_0011s0210 Medicago truncatula MTR_0011s0210 I 0.840
MTR_0011s0260 Medicago truncatula MTR_0011s0260 I 0.840
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.840