MTR_4g033295 (Medicago truncatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 MTR_4g033295 T041642_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.888 0.898
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.888 0.898
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.846 0.878
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH29302 bHLH 127 175
KEH29303 bHLH 127 158
KEH29304 bHLH 127 175

Links

Other bHLH family TFs
Other Medicago truncatula TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.888
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.888
TCM_036484 Theobroma cacao TCM_036484 I 0.888
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.888
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.888
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.888
Pm004181 Prunus mume Pm004181 I 0.888
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.888
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.888
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.888
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.888
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.888
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.888
mgf002701m Mimulus guttatus mgf002701m I 0.888
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.888
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.888
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.888
MDP0000269890 Malus domestica MDP0000269890 I 0.888
Bo6g043840 Brassica oleracea Bo6g043840 I 0.888
Bo8g026850 Brassica oleracea Bo8g026850 I 0.888
Bra028088 Brassica rapa Bra028088 I 0.888
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.888
PK06301.1 Cannabis sativa PK06301.1 I 0.888
BHLH80 Arabidopsis thaliana AT1G35460 D 0.888
BHLH81 Arabidopsis thaliana AT4G09180 I 0.888
Bra036760 Brassica rapa Bra036760 I 0.888
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.888
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.888
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.888
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.888
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.888
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.888
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.888
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.888
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.876
MDP0000264179 Malus domestica MDP0000264179 N 0.861
cassava38615.m1 Manihot esculenta cassava38615.m1 N 0.861
POPTR_0013s11200 Populus trichocarpa POPTR_0013s11200 N 0.861
Cla003934 Citrullus lanatus Cla003934 N 0.861
POPTR_0019s10900 Populus trichocarpa POPTR_0019s10900 N 0.861
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.858
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.858
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.858
Bo5g085170 Brassica oleracea Bo5g085170 I 0.852
Bra034421 Brassica rapa Bra034421 I 0.852
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.849
Pm016406 Prunus mume Pm016406 I 0.846
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.846
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.846
OBART09G14660 Oryza barthii OBART09G14660 I 0.846
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.846
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.846
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.846
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.846
OBART08G19860 Oryza barthii OBART08G19860 I 0.846
OB08G26810 Oryza brachyantha OB08G26810 I 0.846
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.846
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.846
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.846
F775_24151 Aegilops tauschii F775_24151 I 0.846
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.846
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.846
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.846
OS08G0506700 Oryza sativa OS08G0506700 D 0.846
OS09G0487900 Oryza sativa OS09G0487900 I 0.846
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.846
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.846
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.846
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.846
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.846
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.846
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.846
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.846
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.846
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.843
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.842
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.839