CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g087920
(
Medicago truncatula
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
MTR_4g087920
T041657_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.894
0.780
PK07858.1
M01123_2.00
Cannabis sativa
HCACGTGB
VCACGTGD
PBM
Lambert et al.(2019)
pTH11370
0.852
0.680
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES90327
bHLH
76
125
LKNHREAERRRRERINGHLGTLRGLVASTHQKMDKATILAEVISQVKELK
Links
Other
bHLH
family TFs
Other
Medicago truncatula
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy