OB11G19520 (Oryza brachyantha)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OB11G19520 T042058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.914 0.961
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.914 0.961
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.902 0.941
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.902 0.922
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.902 0.922
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.902 0.922
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.888 0.961
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.875 0.882
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.875 0.882
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864 0.843
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864 0.824
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864 0.824
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB11G19520.1 bHLH 82 132

Links

Other bHLH family TFs
Other Oryza brachyantha TFs

901 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.000
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.000
Bra032973 Brassica rapa Bra032973 N 0.000
Ca_24979 Cicer arietinum Ca_24979 N 0.000
GE16904 Drosophila yakuba FBgn0234394 N 0.000
LjSGA_135269.1 Lotus japonicus LjSGA_135269.1 N 0.000
MDP0000420968 Malus domestica MDP0000420968 N 0.000
OMERI08G12580 Oryza meridionalis OMERI08G12580 N 0.000
Si014095m.g Setaria italica Si014095m.g N 0.000
Traes_7AS_FCC142DBE Triticum aestivum Traes_7AS_FCC142DBE N 0.000
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.000
TRIUR3_03984 Triticum urartu TRIUR3_03984 N 0.000