OBART08G15650 (Oryza barthii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OBART08G15650 T042166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07858.1
M01123_2.00 		Cannabis sativa
HCACGTGB
VCACGTGD		 PBM
Lambert et al.(2019)
pTH11370 		0.840 0.880
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART08G15650.1 bHLH 128 177

Links

Other bHLH family TFs
Other Oryza barthii TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI08G12930 Oryza meridionalis OMERI08G12930 I 0.914
OMERI09G07780 Oryza meridionalis OMERI09G07780 I 0.914
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I 0.914
LPERR09G06880 Leersia perrieri LPERR09G06880 I 0.914
GRMZM2G107276 Zea mays GRMZM2G107276 I 0.914
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I 0.914
ONIVA08G16750 Oryza nivara ONIVA08G16750 I 0.914
OS09G0410700 Oryza sativa OS09G0410700 I 0.914
ONIVA09G09550 Oryza nivara ONIVA09G09550 I 0.914
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I 0.914
BGIOSGA026937 Oryza indica BGIOSGA026937 I 0.914
BGIOSGA029777 Oryza indica BGIOSGA029777 I 0.914
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I 0.914
OPUNC08G13730 Oryza punctata OPUNC08G13730 I 0.914
OS08G0432800 Oryza sativa OS08G0432800 I 0.914
Sb02g024460 Sorghum bicolor Sb02g024460 N 0.903
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N 0.903
Si030496m.g Setaria italica Si030496m.g N 0.903
MLOC_12832 Hordeum vulgare MLOC_12832 N 0.903
GRMZM2G176141 Zea mays GRMZM2G176141 N 0.903
GRMZM2G526668 Zea mays GRMZM2G526668 I 0.894
Si013911m.g Setaria italica Si013911m.g I 0.894
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.894
Sb07g021170 Sorghum bicolor Sb07g021170 I 0.894
OLONG_011765 Oryza longistaminata OLONG_011765 N 0.893
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N 0.891
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N 0.891
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.890
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.890
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N 0.883
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N 0.879
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N 0.879
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N 0.879
OGLUM09G10310 Oryza glumaepatula OGLUM09G10310 N 0.876
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N 0.871
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.870
OS03G0260600 Oryza sativa OS03G0260600 I 0.870
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.870
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.870
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.870
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.870
Lus10041493.g Linum usitatissimum Lus10041493.g I 0.870
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.870
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.870
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.870
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.870
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.870
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.870
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.870
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.870
Ca_24775 Cicer arietinum Ca_24775 I 0.870
Ca_14981 Cicer arietinum Ca_14981 N 0.870
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.870
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.870
Cla000223 Citrullus lanatus Cla000223 I 0.870
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.870
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.870
Si039730m.g Setaria italica Si039730m.g I 0.870
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.870
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.870
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.870
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.870
Bra025158 Brassica rapa Bra025158 I 0.870
Bra026510 Brassica rapa Bra026510 I 0.870
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.870
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.870
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.870
Bra004338 Brassica rapa Bra004338 I 0.870
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.870
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.870
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.870
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.870
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.870
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.870
F775_10096 Aegilops tauschii F775_10096 I 0.870
Bo7g081980 Brassica oleracea Bo7g081980 I 0.870
Bra004015 Brassica rapa Bra004015 I 0.870
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.870
BHLH30 Arabidopsis thaliana AT1G68810 I 0.870
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.870
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.870
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.870
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.870
Bo2g138630 Brassica oleracea Bo2g138630 I 0.870
BHLH32 Arabidopsis thaliana AT3G25710 I 0.870
MTR_5g066080 Medicago truncatula MTR_5g066080 N 0.870
OB03G21490 Oryza brachyantha OB03G21490 I 0.870
OBART03G11320 Oryza barthii OBART03G11320 I 0.870
Bo6g108270 Brassica oleracea Bo6g108270 I 0.870
OB09G16590 Oryza brachyantha OB09G16590 N 0.867
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N 0.866
GLYMA01G02930 Glycine max GLYMA01G02930 N 0.862
Ca_18110 Cicer arietinum Ca_18110 N 0.862
Cla022500 Citrullus lanatus Cla022500 N 0.859
PK01498.1 Cannabis sativa PK01498.1 N 0.859
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N 0.859
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N 0.859
Cucsa.160650 Cucumis sativus Cucsa.160650 N 0.859
cassava34286.m1 Manihot esculenta cassava34286.m1 N 0.859
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N 0.859
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.858
Ciclev10020323m.g Citrus clementina Ciclev10020323m.g I 0.852
orange1.1g026943m.g Citrus sinensis orange1.1g026943m.g I 0.852
PRUPE_ppa019545mg Prunus persica PRUPE_ppa019545mg N 0.851
Pm002160 Prunus mume Pm002160 N 0.851
MDP0000562627 Malus domestica MDP0000562627 N 0.846
Bo6g095860 Brassica oleracea Bo6g095860 I 0.846
GLYMA14G36010 Glycine max GLYMA14G36010 N 0.846
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N 0.846
GLYMA02G37720 Glycine max GLYMA02G37720 N 0.846
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N 0.842
TCM_000997 Theobroma cacao TCM_000997 N 0.842
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.840
MDP0000271420 Malus domestica MDP0000271420 I 0.840
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.840
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.840
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.840
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.840
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.840
MDP0000319726 Malus domestica MDP0000319726 I 0.840
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I 0.840
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.840
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.840
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.840
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.840
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.840
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.840
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.840
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.840
PK07858.1 Cannabis sativa PK07858.1 D 0.840
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.840
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.840
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.840
mg025182m Mimulus guttatus mg025182m I 0.840
mgf017635m Mimulus guttatus mgf017635m I 0.840
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.840
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.840
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.840
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.840
Cla020671 Citrullus lanatus Cla020671 I 0.840
Pm029004 Prunus mume Pm029004 I 0.840
29738.m001043 Ricinus communis 29738.m001043 I 0.840
GLYMA17G19570 Glycine max GLYMA17G19570 I 0.840
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.840
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.840
Ca_08440 Cicer arietinum Ca_08440 I 0.840
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.840
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.840
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.840
TCM_011873 Theobroma cacao TCM_011873 I 0.840
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.840
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I 0.840
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.840
evm.TU.supercontig_65.63 Carica papaya evm.TU.supercontig_65.63 N 0.839
Gorai.012G124100 Gossypium raimondii Gorai.012G124100 N 0.839