OGLUM05G00230 (Oryza glumaepatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OGLUM05G00230 T042283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.914 0.902
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.901 0.843
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.901 0.843
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.888 0.882
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.888 0.882
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.875 0.882
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.875 0.843
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.875 0.843
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.875 0.824
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868 0.765
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864 0.784
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864 0.765
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G00230.1 bHLH 69 119
OGLUM05G00230.2 bHLH 187 237
OGLUM05G00230.3 bHLH 187 237
OGLUM05G00230.4 bHLH 187 237

Links

Other bHLH family TFs
Other Oryza glumaepatula TFs

885 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_01228 Arthroderma benhamiae ARB_01228 I 0.000
e_gw1.00168.36.1 Aspergillus carbonarius e_gw1.00168.36.1 I 0.000
ACLA_037870 Aspergillus clavatus CADACLAG00003757 I 0.000
CADAFLAG00002659 Aspergillus flavus CADAFLAG00002659 I 0.000
AFUA_3G10030 Aspergillus fumigatus CADAFUAG00005370 I 0.000
ANIA_04985 Aspergillus nidulans CADANIAG00005410 D 0.000
CADANGAG00012848 Aspergillus niger CADANGAG00012848 I 0.000
CADAORAG00001156 Aspergillus oryzae CADAORAG00001156 I 0.000
ATEG_04526 Aspergillus terreus CADATEAG00005811 I 0.000
BDDG_03489 Blastomyces dermatitidis BDDG_03489 I 0.000
PVAR5_1902 Byssochlamys spectabilis PVAR5_1902 I 0.000
HCBG_02461 Histoplasma capsulatum HCBG_02461 I 0.000
MGYG_00631 Microsporum gypseum MGYG_00631 I 0.000
NFIA_067270 Neosartorya fischeri CADNFIAG00005884 I 0.000
PABG_07472 Paracoccidioides brasiliensis PABG_07472 I 0.000
PAAG_07889 Paracoccidioides sp lutzii PAAG_07889 I 0.000
Pc13g10790 Penicillium chrysogenum Pc13g10790 I 0.000
PDIP_28630 Penicillium digitatum PDIP_28630 I 0.000
PEX1_022480 Penicillium expansum PEX1_022480 I 0.000
PITC_060230 Penicillium italicum PITC_060230 I 0.000
PITC_060220 Penicillium italicum PITC_060220 I 0.000
PMAA_025950 Penicillium marneffei PMAA_025950 I 0.000
PDE_04690 Penicillium oxalicum PDE_04690 I 0.000
PCH_Pc13g10790 Penicillium rubens PCH_Pc13g10790 I 0.000
U727_00434350231 Penicillium solitum U727_00434350231 I 0.000
PMAA_025950 Talaromyces marneffei PMAA_025950 I 0.000
TEQG_00974 Trichophyton equinum TEQG_00974 I 0.000
H101_05717 Trichophyton interdigitale H101_05717 I 0.000
H102_08324 Trichophyton rubrum H102_08324 I 0.000
H105_08351 Trichophyton soudanense H105_08351 I 0.000
TESG_04508 Trichophyton tonsurans TESG_04508 I 0.000
TRV_01280 Trichophyton verrucosum TRV_01280 I 0.000