OLONG_001206 (Oryza longistaminata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OLONG_001206 T042366_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.881 0.940
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.881 0.920
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.868 0.900
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.868 0.880
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.868 0.880
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.868 0.880
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.855 0.920
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.855 0.860
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.855 0.860
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.851 0.840
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.851 0.820
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.851 0.820
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842 0.780
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_001206-R1 bHLH 119 168

Links

Other bHLH family TFs
Other Oryza longistaminata TFs

756 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.000
A_07725 Schistosoma haematobium A_07725 I 0.000
Bm4071 Brugia malayi Bm4071 N 0.000
CapteG176021 Capitella teleta CapteG176021 I 0.000
CapteG223614 Capitella teleta CapteG223614 I 0.000
CapteG76620 Capitella teleta CapteG76620 I 0.000
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.000
csin111588 Clonorchis sinensis csin111588 I 0.000
D915_06717 Fasciola hepatica D915_06717 I 0.000
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.000
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.000
EEL_0000648301 Elaeophora elaphi EEL_0000648301 N 0.000
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.000
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.000
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.000
L889_g21793 Steinernema feltiae L889_g21793 I 0.000
L892_g9690 Steinernema scapterisci L892_g9690 I 0.000
L893_g27175 Steinernema glaseri L893_g27175 I 0.000
L898_g5709 Steinernema monticolum L898_g5709 I 0.000
LOAG_08891 Loa loa LOAG_08891 I 0.000
nAv.1.0.1.g07581 Acanthocheilonema viteae nAv.1.0.1.g07581 N 0.000
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.000
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.000
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.000
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.000
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.000
Smp_054430 Schistosoma mansoni Smp_054430 I 0.000
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.000
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.000
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.000
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.000
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.000
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.000
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.000
T265_09545 Opisthorchis viverrini T265_09545 I 0.000
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.000
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.000
WBGene00237257 Onchocerca volvulus WBGene00237257 N 0.000
WUBG_08818 Wuchereria bancrofti WUBG_08818 N 0.000