CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G33580
(
Oryza meridionalis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OMERI03G33580
T042500_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV
BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.855
0.889
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS
SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.843
0.867
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.843
0.867
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G33580.1
bHLH
339
383
AAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEI
Links
Other
bHLH
family TFs
Other
Oryza meridionalis
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy