CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI05G15760
(
Oryza meridionalis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OMERI05G15760
T042518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.852
0.854
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.852
0.812
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI05G15760.1
bHLH
141
188
DPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR
Links
Other
bHLH
family TFs
Other
Oryza meridionalis
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy