OMERI07G05880 (Oryza meridionalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OMERI07G05880 T042537_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.911 0.918
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI07G05880.1 bHLH 489 537

Links

Other bHLH family TFs
Other Oryza meridionalis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK09702.1 Cannabis sativa PK09702.1 D 0.911
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.857
mgf008560m Mimulus guttatus mgf008560m I 0.855
Aquca_026_00421 Aquilegia coerulea Aquca_026_00421 I 0.861
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I 0.911
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.856
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.856
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.856
Ciclev10011214m.g Citrus clementina Ciclev10011214m.g I 0.861
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I 0.911
Eucgr.E01043 Eucalyptus grandis Eucgr.E01043 I 0.849
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I 0.911
Eucgr.H02385 Eucalyptus grandis Eucgr.H02385 I 0.854
evm.TU.supercontig_52.26 Carica papaya evm.TU.supercontig_52.26 I 0.887
e_gw1.11.52.1 Physcomitrella patens e_gw1.11.52.1 I 0.840
Cucsa.313090 Cucumis sativus Cucsa.313090 I 0.861
VIT_02s0012g01320 Vitis vinifera VIT_02s0012g01320 I 0.861
TT8 Vitis vinifera VIT_07s0104g00090 I 0.911
Ca_07836 Cicer arietinum Ca_07836 I 0.911
Cla016454 Citrullus lanatus Cla016454 I 0.861
Pm002304 Prunus mume Pm002304 I 0.857
Pm020164 Prunus mume Pm020164 I 0.911
29647.m002101 Ricinus communis 29647.m002101 I 0.911
29827.m002528 Ricinus communis 29827.m002528 I 0.861
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I 0.911
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I 0.911
cassava45205.m1 Manihot esculenta cassava45205.m1 I 0.861
cassava8764.m1 Manihot esculenta cassava8764.m1 I 0.861
evm.TU.supercontig_71.72 Carica papaya evm.TU.supercontig_71.72 I 0.861
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I 0.911
Lus10030970.g Linum usitatissimum Lus10030970.g I 0.861
MDP0000225680 Malus domestica MDP0000225680 I 0.911
MDP0000617077 Malus domestica MDP0000617077 I 0.911
orange1.1g005651m.g Citrus sinensis orange1.1g005651m.g I 0.861
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I 0.911
Pavir.Ia03512 Panicum virgatum Pavir.Ia03512 I 0.861
Pavir.J28686 Panicum virgatum Pavir.J28686 I 0.861
Pavir.J38781 Panicum virgatum Pavir.J38781 I 0.861
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I 0.911
SapurV1A.0289s0260 Salix purpurea SapurV1A.0289s0260 I 0.887
SapurV1A.0741s0050 Salix purpurea SapurV1A.0741s0050 I 0.861
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I 0.911
Lus10024871.g Linum usitatissimum Lus10024871.g I 0.840
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.840
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I 0.849
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.840
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I 0.911
Gorai.006G216700 Gossypium raimondii Gorai.006G216700 I 0.864
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I 0.911
Lus10000484.g Linum usitatissimum Lus10000484.g I 0.864
Lus10004574.g Linum usitatissimum Lus10004574.g I 0.864
Lus10004575.g Linum usitatissimum Lus10004575.g I 0.864
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.844
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.840
Lus10018787.g Linum usitatissimum Lus10018787.g I 0.840
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.842
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.847
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.857
AMTR_s00002p00225810 Amborella trichopoda AMTR_s00002p00225810 I 0.861
GRMZM2G049229 Zea mays GRMZM2G049229 I 0.861
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I 0.849
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.845
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I 0.849
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I 0.898
GSMUA_Achr4G16980_001 Musa acuminata GSMUA_Achr4G16980_001 I 0.849
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I 0.911
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I 0.849
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I 0.849
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I 0.849
LPERR07G06180 Leersia perrieri LPERR07G06180 I 0.914
LPERR10G15300 Leersia perrieri LPERR10G15300 I 0.861
GRMZM2G001930 Zea mays GRMZM2G001930 I 0.861
GLYMA19G33770 Glycine max GLYMA19G33770 I 0.840
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.845
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I 0.911
TT8 Arabidopsis thaliana AT4G09820 I 0.856
BGIOSGA033493 Oryza indica BGIOSGA033493 I 0.861
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.857
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I 0.911
BRADI3G34200 Brachypodium distachyon BRADI3G34200 I 0.861
F775_11371 Aegilops tauschii F775_11371 I 0.857
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.856
GLYMA02G16670 Glycine max GLYMA02G16670 I 0.911
GLYMA03G30940 Glycine max GLYMA03G30940 I 0.868
GLYMA10G03140 Glycine max GLYMA10G03140 I 0.911
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.857
MLOC_6900 Hordeum vulgare MLOC_6900 I 0.887
MLOC_71611 Hordeum vulgare MLOC_71611 I 0.861
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I 0.911
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I 0.911
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.857
Sb01g028230 Sorghum bicolor Sb01g028230 I 0.861
Sb02g006390 Sorghum bicolor Sb02g006390 I 0.911
Si029106m.g Setaria italica Si029106m.g I 0.911
Si039973m.g Setaria italica Si039973m.g I 0.861
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I 0.911
TCM_004403 Theobroma cacao TCM_004403 I 0.911
TCM_015714 Theobroma cacao TCM_015714 I 0.861
Traes_1AS_4DA31F550 Triticum aestivum Traes_1AS_4DA31F550 I 0.887
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.857
POPTR_0002s05510 Populus trichocarpa POPTR_0002s05510 I 0.887
POPTR_0001s02450 Populus trichocarpa POPTR_0001s02450 I 0.861
MTR_1g072320 Medicago truncatula MTR_1g072320 I 0.911
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.840
OBART07G07130 Oryza barthii OBART07G07130 I 0.914
OGLUM10G19510 Oryza glumaepatula OGLUM10G19510 I 0.861
OLONG_011820 Oryza longistaminata OLONG_011820 I 0.861
ONIVA07G05400 Oryza nivara ONIVA07G05400 I 0.914
ONIVA10G22030 Oryza nivara ONIVA10G22030 I 0.861
OPUNC10G17860 Oryza punctata OPUNC10G17860 I 0.861
ORGLA10G0146100 Oryza glaberrima ORGLA10G0146100 I 0.861
ORUFI10G20700 Oryza rufipogon ORUFI10G20700 I 0.861
MYC2 Oryza sativa OS10G0575000 I 0.861
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I 0.911
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.857