ONIVA02G26110 (Oryza nivara)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ONIVA02G26110 T042603_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.887 0.863
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH

DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.851 0.804
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN

NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.851 0.804
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.845 0.784
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.845 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA02G26110.1 bHLH 230 280

Links

Other bHLH family TFs
Other Oryza nivara TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.914
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.914
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.914
Si010513m.g Setaria italica Si010513m.g I 0.914
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.914
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.914
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.914
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.914
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.914
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.914
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.914
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.914
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.914
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.914
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.914
OB02G30670 Oryza brachyantha OB02G30670 I 0.914
OBART02G23210 Oryza barthii OBART02G23210 I 0.914
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.903
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.903
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.902
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.902
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.899
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.897
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.897
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.894
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.894
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.894
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.894
MDP0000273574 Malus domestica MDP0000273574 I 0.894
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.894
PK07850.1 Cannabis sativa PK07850.1 I 0.894
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.894
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.894
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.894
Pm007619 Prunus mume Pm007619 I 0.894
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.894
mgf005043m Mimulus guttatus mgf005043m I 0.894
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.894
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.894
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.894
TCM_020066 Theobroma cacao TCM_020066 I 0.894
Bra004748 Brassica rapa Bra004748 I 0.894
Bo4g019620 Brassica oleracea Bo4g019620 I 0.894
Bra000291 Brassica rapa Bra000291 I 0.894
Bo3g036400 Brassica oleracea Bo3g036400 I 0.894
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.894
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.894
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.894
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.891
30149.m000231 Ricinus communis 30149.m000231 I 0.891
Pm000447 Prunus mume Pm000447 I 0.887
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.887
Cla017792 Citrullus lanatus Cla017792 I 0.887
29216.m000261 Ricinus communis 29216.m000261 I 0.887
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.887
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.887
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.887
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.887
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.887
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.887
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.887
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.887
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.887
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.887
TCM_024842 Theobroma cacao TCM_024842 I 0.887
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.887
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.887
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.887
F775_24151 Aegilops tauschii F775_24151 I 0.887
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.887
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.887
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.887
MDP0000180376 Malus domestica MDP0000180376 I 0.887
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.887
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.887
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.887
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.887
PK18038.1 Cannabis sativa PK18038.1 I 0.887
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.887
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.887
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.887
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.887
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.887
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.887
mgf016734m Mimulus guttatus mgf016734m I 0.887
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.887
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.887
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.887
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.887
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.887
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.887
Pm025821 Prunus mume Pm025821 I 0.887
OBART08G19860 Oryza barthii OBART08G19860 I 0.887
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.887
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.887
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.887
OBART09G14660 Oryza barthii OBART09G14660 I 0.887
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.887
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.887
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.887
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.887
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.887
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.887
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.887
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.887
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.887
OB08G26810 Oryza brachyantha OB08G26810 I 0.887
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.887
OS09G0487900 Oryza sativa OS09G0487900 I 0.887
OS08G0506700 Oryza sativa OS08G0506700 D 0.887
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.887
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.887
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.887
30152.m002405 Ricinus communis 30152.m002405 I 0.884
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.884
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.884
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.884
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.884
Si017194m.g Setaria italica Si017194m.g I 0.884
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.884
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.875
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.873
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.873
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.867
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.867
Cla015469 Citrullus lanatus Cla015469 I 0.867
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.863
TCM_005925 Theobroma cacao TCM_005925 I 0.863
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.861
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.858
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.858
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.858
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.857
OB04G24170 Oryza brachyantha OB04G24170 I 0.856
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.856
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.856
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.856
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.856
OS04G0489600 Oryza sativa OS04G0489600 I 0.856
OBART04G16900 Oryza barthii OBART04G16900 I 0.856
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.856
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.856
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.856
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.856
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.856
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.856
Bo4g194080 Brassica oleracea Bo4g194080 N 0.856
Bra037732 Brassica rapa Bra037732 N 0.856
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.855
Ca_26916 Cicer arietinum Ca_26916 I 0.854
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.854
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.854
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.853
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.851
GLYMA13G41670 Glycine max GLYMA13G41670 I 0.851
Bra016886 Brassica rapa Bra016886 I 0.851
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.851
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I 0.851
Bo4g191390 Brassica oleracea Bo4g191390 I 0.851
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I 0.851
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I 0.851
PK20089.1 Cannabis sativa PK20089.1 I 0.851
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I 0.851
BHLH122 Arabidopsis thaliana AT1G51140 D 0.851
GRMZM2G417597 Zea mays GRMZM2G417597 I 0.851
Pavir.J14004 Panicum virgatum Pavir.J14004 I 0.851
Pavir.J00377 Panicum virgatum Pavir.J00377 I 0.851
MTR_2g098310 Medicago truncatula MTR_2g098310 I 0.851
GLYMA15G03740 Glycine max GLYMA15G03740 I 0.851
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I 0.851
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I 0.851
Bo6g024810 Brassica oleracea Bo6g024810 I 0.851
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I 0.851
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I 0.851
GLYMA12G05930 Glycine max GLYMA12G05930 I 0.851
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I 0.851
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I 0.851
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I 0.851
Si029614m.g Setaria italica Si029614m.g I 0.851
GRMZM2G085467 Zea mays GRMZM2G085467 I 0.851
Sb02g028300 Sorghum bicolor Sb02g028300 I 0.851
Bra018896 Brassica rapa Bra018896 I 0.851
Ca_02662 Cicer arietinum Ca_02662 I 0.851
TCM_040564 Theobroma cacao TCM_040564 I 0.851
Ca_14223 Cicer arietinum Ca_14223 I 0.851
Carubv10009458m.g Capsella rubella Carubv10009458m.g I 0.851
GLYMA11G13960 Glycine max GLYMA11G13960 I 0.851
mgf018372m Mimulus guttatus mgf018372m N 0.849
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.849
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.846
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.846
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.846
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.846
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.845
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.845
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.845
BHLH81 Arabidopsis thaliana AT4G09180 I 0.845
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.845
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.845
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.845
TCM_036484 Theobroma cacao TCM_036484 I 0.845
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.845
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.845
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.845
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.845
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.845
BHLH80 Arabidopsis thaliana AT1G35460 D 0.845
PK06301.1 Cannabis sativa PK06301.1 I 0.845
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.845
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.845
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.845
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.845
Bra036760 Brassica rapa Bra036760 I 0.845
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.845
Bra028088 Brassica rapa Bra028088 I 0.845
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.845
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.845
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.845
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.845
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.845
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.845
Bo8g026850 Brassica oleracea Bo8g026850 I 0.845
Bo6g043840 Brassica oleracea Bo6g043840 I 0.845
Pm016406 Prunus mume Pm016406 I 0.845
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.845
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.845
MDP0000269890 Malus domestica MDP0000269890 I 0.845
Pm004181 Prunus mume Pm004181 I 0.845
mgf002701m Mimulus guttatus mgf002701m I 0.845
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.841
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.839