CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G38760
(
Oryza nivara
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ONIVA03G38760
T042632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.852
0.875
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.852
0.833
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G38760.1
bHLH
164
211
DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR
ONIVA03G38760.2
bHLH
142
189
DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR
ONIVA03G38760.3
bHLH
142
189
DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR
Links
Other
bHLH
family TFs
Other
Oryza nivara
TFs
230 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy