ONIVA04G15000 (Oryza nivara)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ONIVA04G15000 T042640_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.887 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G15000.1 bHLH 298 348
ONIVA04G15000.2 bHLH 214 264

Links

Other bHLH family TFs
Other Oryza nivara TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OBART04G16900 Oryza barthii OBART04G16900 I 0.914
OB04G24170 Oryza brachyantha OB04G24170 I 0.914
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.914
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.914
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.914
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.914
OS04G0489600 Oryza sativa OS04G0489600 I 0.914
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.914
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.914
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.914
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.914
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.914
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.894
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.894
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.894
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.894
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.894
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.894
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.894
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.894
BHLH128 Arabidopsis thaliana AT1G05805 I 0.894
F775_26506 Aegilops tauschii F775_26506 I 0.894
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.894
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.894
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.894
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.894
Ca_14007 Cicer arietinum Ca_14007 I 0.894
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.894
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.891
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.891
Bo5g007030 Brassica oleracea Bo5g007030 I 0.891
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.891
Bo5g006980 Brassica oleracea Bo5g006980 I 0.891
Bra015456 Brassica rapa Bra015456 I 0.891
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.891
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.887
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.887
MDP0000307685 Malus domestica MDP0000307685 I 0.887
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.887
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.887
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.887
30169.m006403 Ricinus communis 30169.m006403 I 0.887
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.887
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.887
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.887
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.887
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.879
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.879
Ca_07284 Cicer arietinum Ca_07284 I 0.879
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.879
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.865
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.860
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.857
OBART01G40680 Oryza barthii OBART01G40680 I 0.857
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.857
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.857
OB01G49420 Oryza brachyantha OB01G49420 I 0.857
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.857
F775_24576 Aegilops tauschii F775_24576 I 0.857
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.857
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.857
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.857
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.857
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.857
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.857
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.857
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.857
OS01G0900800 Oryza sativa OS01G0900800 I 0.857
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.857
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.857
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.856
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.856
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.856
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.856
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.856
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.856
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.856
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.856
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.856
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.856
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.856
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.856
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.856
OB02G30670 Oryza brachyantha OB02G30670 I 0.856
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.856
OBART02G23210 Oryza barthii OBART02G23210 I 0.856
Si010513m.g Setaria italica Si010513m.g I 0.856
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.856
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.854
Si001123m.g Setaria italica Si001123m.g I 0.854
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.854
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.854
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.853
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I 0.851
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I 0.851
MLOC_30102 Hordeum vulgare MLOC_30102 I 0.851
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I 0.851
Si030166m.g Setaria italica Si030166m.g I 0.851
GRMZM2G142932 Zea mays GRMZM2G142932 I 0.851
GRMZM2G153454 Zea mays GRMZM2G153454 I 0.851
Pavir.J25484 Panicum virgatum Pavir.J25484 I 0.851
Si013950m.g Setaria italica Si013950m.g I 0.851
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.851
Ca_18899 Cicer arietinum Ca_18899 I 0.851
Cla006394 Citrullus lanatus Cla006394 I 0.851
mgf016092m Mimulus guttatus mgf016092m I 0.851
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.851
Bo4g015860 Brassica oleracea Bo4g015860 I 0.851
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I 0.851
Bra004678 Brassica rapa Bra004678 I 0.851
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.851
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I 0.851
Sb07g027810 Sorghum bicolor Sb07g027810 I 0.851
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.845
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.845
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.844
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.844
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.841
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.839
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.839