CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC09G11520
(
Oryza punctata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OPUNC09G11520
T042835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.840
0.653
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC09G11520.1
bHLH
29
77
GRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYIRELR
Links
Other
bHLH
family TFs
Other
Oryza punctata
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI06G24090
Oryza meridionalis
OMERI06G24090
I
0.914
BGIOSGA030928
Oryza indica
BGIOSGA030928
N
0.901
OMERI09G10230
Oryza meridionalis
OMERI09G10230
N
0.890
OGLUM08G19000
Oryza glumaepatula
OGLUM08G19000
N
0.890
OB08G25230
Oryza brachyantha
OB08G25230
N
0.890
LPERR08G15030
Leersia perrieri
LPERR08G15030
N
0.890
ONIVA08G20180
Oryza nivara
ONIVA08G20180
N
0.890
OPUNC08G16020
Oryza punctata
OPUNC08G16020
N
0.890
Sb07g023280
Sorghum bicolor
Sb07g023280
N
0.890
OS08G0477900
Oryza sativa
OS08G0477900
N
0.890
ORUFI08G20260
Oryza rufipogon
ORUFI08G20260
N
0.890
ORGLA08G0157100
Oryza glaberrima
ORGLA08G0157100
N
0.890
GRMZM2G082630
Zea mays
GRMZM2G082630
N
0.890
Si014356m.g
Setaria italica
Si014356m.g
N
0.890
BGIOSGA028855
Oryza indica
BGIOSGA028855
N
0.890
OBART09G13210
Oryza barthii
OBART09G13210
N
0.886
ONIVA09G13640
Oryza nivara
ONIVA09G13640
N
0.886
ORUFI09G14130
Oryza rufipogon
ORUFI09G14130
N
0.886
LPERR01G07000
Leersia perrieri
LPERR01G07000
I
0.878
BRADI4G32470
Brachypodium distachyon
BRADI4G32470
N
0.875
MLOC_2366
Hordeum vulgare
MLOC_2366
N
0.875
OGLUM09G13640
Oryza glumaepatula
OGLUM09G13640
N
0.875
Pavir.J25149
Panicum virgatum
Pavir.J25149
N
0.870
Pavir.Fa00651
Panicum virgatum
Pavir.Fa00651
N
0.870
BRADI3G38360
Brachypodium distachyon
BRADI3G38360
N
0.870
mgf022146m
Mimulus guttatus
mgf022146m
N
0.869
F775_02130
Aegilops tauschii
F775_02130
N
0.866
Traes_2DL_5F0BD9D6F
Triticum aestivum
Traes_2DL_5F0BD9D6F
N
0.866
TRIUR3_09991
Triticum urartu
TRIUR3_09991
N
0.866
Traes_2BL_649181D92
Triticum aestivum
Traes_2BL_649181D92
N
0.866
Traes_2AL_7A37B5232
Triticum aestivum
Traes_2AL_7A37B5232
N
0.866
MLOC_70640
Hordeum vulgare
MLOC_70640
N
0.866
Pavir.J16121
Panicum virgatum
Pavir.J16121
N
0.860
Pavir.Ba01985
Panicum virgatum
Pavir.Ba01985
N
0.860
GRMZM2G113257
Zea mays
GRMZM2G113257
N
0.858
GRMZM2G145146
Zea mays
GRMZM2G145146
N
0.858
Si033077m.g
Setaria italica
Si033077m.g
N
0.858
Sb02g026920
Sorghum bicolor
Sb02g026920
N
0.858
Traes_5BL_553BE31FE
Triticum aestivum
Traes_5BL_553BE31FE
N
0.855
Ca_12194
Cicer arietinum
Ca_12194
N
0.853
Ciclev10001768m.g
Citrus clementina
Ciclev10001768m.g
N
0.853
Cucsa.388780
Cucumis sativus
Cucsa.388780
N
0.853
Aquca_017_00590
Aquilegia coerulea
Aquca_017_00590
N
0.853
cassava36725.valid.m1
Manihot esculenta
cassava36725.valid.m1
N
0.853
Cla011475
Citrullus lanatus
Cla011475
N
0.853
Pm003525
Prunus mume
Pm003525
N
0.853
29883.m001988
Ricinus communis
29883.m001988
N
0.853
Ciclev10021443m.g
Citrus clementina
Ciclev10021443m.g
N
0.853
Cla015040
Citrullus lanatus
Cla015040
N
0.853
Cucsa.289090
Cucumis sativus
Cucsa.289090
N
0.853
Eucgr.H04337
Eucalyptus grandis
Eucgr.H04337
N
0.853
SapurV1A.0006s1290
Salix purpurea
SapurV1A.0006s1290
N
0.853
GLYMA20G36770
Glycine max
GLYMA20G36770
N
0.853
PK20184.1
Cannabis sativa
PK20184.1
N
0.853
PK25419.1
Cannabis sativa
PK25419.1
N
0.853
chr5.LjT29J15.30.nc
Lotus japonicus
chr5.LjT29J15.30.nc
N
0.853
chr1.CM0375.380.nc
Lotus japonicus
chr1.CM0375.380.nc
N
0.853
orange1.1g022649m.g
Citrus sinensis
orange1.1g022649m.g
N
0.853
MDP0000295593
Malus domestica
MDP0000295593
N
0.853
evm.TU.supercontig_117.94
Carica papaya
evm.TU.supercontig_117.94
N
0.853
Ca_07790
Cicer arietinum
Ca_07790
N
0.853
gene16564-v1.0-hybrid
Fragaria vesca
gene16564-v1.0-hybrid
N
0.853
Gorai.001G242500
Gossypium raimondii
Gorai.001G242500
N
0.853
Gorai.007G277200
Gossypium raimondii
Gorai.007G277200
N
0.853
Gorai.007G141800
Gossypium raimondii
Gorai.007G141800
N
0.853
Eucgr.B01487
Eucalyptus grandis
Eucgr.B01487
N
0.853
Ca_03755
Cicer arietinum
Ca_03755
N
0.853
GLYMA19G34360
Glycine max
GLYMA19G34360
N
0.853
Solyc02g076920.2
Solanum lycopersicum
Solyc02g076920.2
I
0.853
GLYMA03G31510
Glycine max
GLYMA03G31510
N
0.853
POPTR_0002s04620
Populus trichocarpa
POPTR_0002s04620
N
0.853
PGSC0003DMG400010208
Solanum tuberosum
PGSC0003DMG400010208
I
0.853
GLYMA02G16110
Glycine max
GLYMA02G16110
N
0.853
GLYMA10G03690
Glycine max
GLYMA10G03690
N
0.853
GLYMA10G30430
Glycine max
GLYMA10G30430
N
0.853
TCM_004217
Theobroma cacao
TCM_004217
N
0.853
PRUPE_ppa008172mg
Prunus persica
PRUPE_ppa008172mg
N
0.853
VIT_05s0020g04620
Vitis vinifera
VIT_05s0020g04620
N
0.853
VIT_07s0141g00220
Vitis vinifera
VIT_07s0141g00220
N
0.853
VIT_14s0030g02230
Vitis vinifera
VIT_14s0030g02230
N
0.853
MTR_1g080890
Medicago truncatula
MTR_1g080890
N
0.853
MTR_1g070870
Medicago truncatula
MTR_1g070870
N
0.853
TCM_026346
Theobroma cacao
TCM_026346
N
0.853
OMERI01G07330
Oryza meridionalis
OMERI01G07330
I
0.847
BGIOSGA003013
Oryza indica
BGIOSGA003013
I
0.847
OGLUM01G08450
Oryza glumaepatula
OGLUM01G08450
I
0.847
ORUFI01G08040
Oryza rufipogon
ORUFI01G08040
I
0.847
ORGLA01G0065100
Oryza glaberrima
ORGLA01G0065100
I
0.847
OPUNC01G07130
Oryza punctata
OPUNC01G07130
I
0.847
ONIVA01G09540
Oryza nivara
ONIVA01G09540
I
0.847
OS01G0218100
Oryza sativa
OS01G0218100
I
0.847
OB01G17480
Oryza brachyantha
OB01G17480
I
0.847
MDP0000176749
Malus domestica
MDP0000176749
N
0.842
Pm020229
Prunus mume
Pm020229
N
0.842
gene08188-v1.0-hybrid
Fragaria vesca
gene08188-v1.0-hybrid
N
0.842
PRUPE_ppa009299mg
Prunus persica
PRUPE_ppa009299mg
N
0.842
PGSC0003DMG400013393
Solanum tuberosum
PGSC0003DMG400013393
N
0.842
Solyc09g083220.2
Solanum lycopersicum
Solyc09g083220.2
N
0.842
PGSC0003DMG400006089
Solanum tuberosum
PGSC0003DMG400006089
N
0.842
GLYMA07G32690
Glycine max
GLYMA07G32690
I
0.840
evm.TU.supercontig_7.53
Carica papaya
evm.TU.supercontig_7.53
I
0.840
Solyc03g005350.2
Solanum lycopersicum
Solyc03g005350.2
N
0.840
PK20225.1
Cannabis sativa
PK20225.1
D
0.840