ORGLA05G0058200 (Oryza glaberrima)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ORGLA05G0058200 T042934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK15505.1
M01125_2.00
Cannabis sativa
NRCACGTGYN

NRCACGTGYN
PBM
Lambert et al.(2019)
pTH10268
0.861 0.694
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0058200.1 bHLH 233 301

Links

Other bHLH family TFs
Other Oryza glaberrima TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OBART05G06380 Oryza barthii OBART05G06380 I 0.914
OB05G15870 Oryza brachyantha OB05G15870 I 0.914
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.914
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.914
OS05G0199800 Oryza sativa OS05G0199800 I 0.914
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.914
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.914
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.914
Si024546m.g Setaria italica Si024546m.g I 0.903
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.903
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.903
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.894
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.882
PGSC0003DMG400022043 Solanum tuberosum PGSC0003DMG400022043 I 0.882
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I 0.882
29912.m005337 Ricinus communis 29912.m005337 I 0.882
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.882
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.879
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.861
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.861
Cla017100 Citrullus lanatus Cla017100 I 0.861
PK15505.1 Cannabis sativa PK15505.1 D 0.861
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.861
MDP0000782908 Malus domestica MDP0000782908 I 0.861
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.861
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.861
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.861
MDP0000252899 Malus domestica MDP0000252899 I 0.860
MDP0000119495 Malus domestica MDP0000119495 I 0.860
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.858
Sb09g006196 Sorghum bicolor Sb09g006196 N 0.855
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.854
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.851
Bo2g032920 Brassica oleracea Bo2g032920 I 0.849
BGIOSGA002941 Oryza indica BGIOSGA002941 N 0.849
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I 0.849
OGLUM01G06710 Oryza glumaepatula OGLUM01G06710 N 0.849
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I 0.849
ONIVA01G07090 Oryza nivara ONIVA01G07090 N 0.849
mgf018190m Mimulus guttatus mgf018190m I 0.848
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.845
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.845
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.845