PGSC0003DMG400017440 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400017440 T043467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SCRM
M09784_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.843 0.540
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400044959 bHLH 39 88

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc05g014590.2 Solanum lycopersicum Solyc05g014590.2 I 0.914
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.887
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.887
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.887
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.887
Cla016068 Citrullus lanatus Cla016068 I 0.887
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.887
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.887
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.887
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.887
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.887
Lus10030609.g Linum usitatissimum Lus10030609.g N 0.878
TCM_006602 Theobroma cacao TCM_006602 I 0.874
PK03241.1 Cannabis sativa PK03241.1 I 0.874
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.870
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.867
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.867
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.867
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.867
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.867
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.867
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.867
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.867
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.867
Si006199m.g Setaria italica Si006199m.g I 0.867
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.863
Pm008898 Prunus mume Pm008898 I 0.863
gene00631-v1.0-hybrid Fragaria vesca gene00631-v1.0-hybrid N 0.863
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.860
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.860
OS04G0301500 Oryza sativa OS04G0301500 N 0.860
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.860
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.860
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.860
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.860
Si010812m.g Setaria italica Si010812m.g N 0.860
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.860
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.860
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.860
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.860
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.860
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.860
Si010413m.g Setaria italica Si010413m.g N 0.860
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.860
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.860
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.860
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.860
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.860
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.859
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.857
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.857
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.857
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.857
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.857
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.857
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.857
mgf019723m Mimulus guttatus mgf019723m I 0.857
Si019518m.g Setaria italica Si019518m.g I 0.857
29631.m001025 Ricinus communis 29631.m001025 N 0.855
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N 0.855
OBART04G06800 Oryza barthii OBART04G06800 N 0.855
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N 0.855
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N 0.855
OMERI03G04040 Oryza meridionalis OMERI03G04040 N 0.855
OS04G0300600 Oryza sativa OS04G0300600 N 0.855
OPUNC04G05620 Oryza punctata OPUNC04G05620 N 0.855
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.854
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.854
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.854
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I 0.850
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I 0.850
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I 0.850
Lus10030880.g Linum usitatissimum Lus10030880.g N 0.848
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.847
Pm020879 Prunus mume Pm020879 I 0.844
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.844
mgf016462m Mimulus guttatus mgf016462m I 0.843
mgf015974m Mimulus guttatus mgf015974m I 0.843
mgf012194m Mimulus guttatus mgf012194m I 0.843
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I 0.843
Bo5g016510 Brassica oleracea Bo5g016510 I 0.843
Bo00285s440 Brassica oleracea Bo00285s440 I 0.843
PK06940.1 Cannabis sativa PK06940.1 I 0.843
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.843
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.843
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.843
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.843
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.843
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.843
Bo8g065080 Brassica oleracea Bo8g065080 I 0.843
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.843
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.843
Bra025226 Brassica rapa Bra025226 I 0.843
SCRM2 Arabidopsis thaliana AT1G12860 I 0.843
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.843
Bra019794 Brassica rapa Bra019794 I 0.843
Bra016749 Brassica rapa Bra016749 I 0.843
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.843
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.843
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.843
Bo9g008020 Brassica oleracea Bo9g008020 I 0.843
Bo7g083870 Brassica oleracea Bo7g083870 I 0.843
PK06841.1 Cannabis sativa PK06841.1 I 0.843
MDP0000247912 Malus domestica MDP0000247912 I 0.843
MDP0000304669 Malus domestica MDP0000304669 I 0.843
MDP0000219146 Malus domestica MDP0000219146 I 0.843
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.843
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.843
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.843
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.843
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.843
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.843
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.843
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.843
MDP0000662999 Malus domestica MDP0000662999 I 0.843
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.843
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.843
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.843
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.843
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.843
SCRM Arabidopsis thaliana AT3G26744 D 0.843
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.843
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.843
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.843
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.843
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.843
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.843
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.843
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.843
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.843
Ca_01394 Cicer arietinum Ca_01394 I 0.843
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.843
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.843
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.843
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.843
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.843
OS01G0928000 Oryza sativa OS01G0928000 I 0.843
OS11G0523700 Oryza sativa OS11G0523700 I 0.843
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.843
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.843
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.843
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.843
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.843
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.843
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.843
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.843
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.843
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.843
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.843
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.843
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.843
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.843
OBART11G15260 Oryza barthii OBART11G15260 I 0.843
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.843
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.843
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.843
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.843
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.843
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.843
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.843
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.843
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.843
30147.m014419 Ricinus communis 30147.m014419 I 0.843
F775_14780 Aegilops tauschii F775_14780 I 0.843
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.843
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.843
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.843
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.843
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.843
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.843
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.843
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.843
Pm016093 Prunus mume Pm016093 I 0.843
Pm024587 Prunus mume Pm024587 I 0.843
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.843
Bra032947 Brassica rapa Bra032947 I 0.843
Cla002682 Citrullus lanatus Cla002682 I 0.843
Cla003283 Citrullus lanatus Cla003283 I 0.843
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.843
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.843
Si001874m.g Setaria italica Si001874m.g I 0.843
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.843
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.843
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.843
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.843
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.843
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.843
Si026212m.g Setaria italica Si026212m.g I 0.843
TCM_017336 Theobroma cacao TCM_017336 I 0.843
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.843
TCM_014741 Theobroma cacao TCM_014741 I 0.843
Bra034246 Brassica rapa Bra034246 I 0.843
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.843
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.843
OBART01G42600 Oryza barthii OBART01G42600 I 0.843
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.840
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.840