PGSC0003DMG400019263 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400019263 T043477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH34
M01704_2.00
Arabidopsis thaliana
VCACGYGH

DCRCGTGB
PBM
Weirauch et al.(2014)
pTH7212
0.879 0.745
BHLH34
M06734_2.00
Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN

NGDCACGTGBNNNNHNNDNNN
Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a
0.879 0.745
BHLH34
M06735_2.00
Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN

NNNNNNNNVCACGTGNNNNNYWY
Dap-seq
OMalley et al.(2016)
bHLH34_col
0.879 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400049590 bHLH 76 126
PGSC0003DMT400049592 bHLH 76 126

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action