PGSC0003DMG400025020 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400025020 T043497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400064398 bHLH 133 181
PGSC0003DMT400064399 bHLH 277 317

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla003883 Citrullus lanatus Cla003883 N 0.914
Ca_19891 Cicer arietinum Ca_19891 N 0.914
Ca_06936 Cicer arietinum Ca_06936 N 0.914
Pm011692 Prunus mume Pm011692 N 0.914
27733.m000033 Ricinus communis 27733.m000033 N 0.914
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.914
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.914
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.914
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.914
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.914
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.914
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.914
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.914
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.914
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.914
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.914
mgf001258m Mimulus guttatus mgf001258m N 0.914
MDP0000295440 Malus domestica MDP0000295440 N 0.914
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.914
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.914
MDP0000296508 Malus domestica MDP0000296508 N 0.914
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.914
PK22680.1 Cannabis sativa PK22680.1 N 0.914
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.914
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.914
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.914
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.914
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.914
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.914
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.914
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.914
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.914
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.914
TCM_031172 Theobroma cacao TCM_031172 N 0.914
Bo3g076150 Brassica oleracea Bo3g076150 N 0.914
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.914
Bo01052s010 Brassica oleracea Bo01052s010 N 0.914
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.914
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.914
BHLH123 Arabidopsis thaliana AT3G20640 N 0.914
Bra001798 Brassica rapa Bra001798 N 0.914
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.914
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.913
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.913
Si022548m.g Setaria italica Si022548m.g N 0.913
Si013853m.g Setaria italica Si013853m.g N 0.913
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.913
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.913
TCM_030051 Theobroma cacao TCM_030051 N 0.913
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.913
F775_20405 Aegilops tauschii F775_20405 N 0.913
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.913
Si010139m.g Setaria italica Si010139m.g N 0.913
Si001796m.g Setaria italica Si001796m.g N 0.913
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.913
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.913
MDP0000301999 Malus domestica MDP0000301999 N 0.913
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.913
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.913
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.913
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.913
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.913
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.913
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.913
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.913
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.913
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.913
Pm009855 Prunus mume Pm009855 N 0.913
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.913
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.913
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.913
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.913
mgf016565m Mimulus guttatus mgf016565m N 0.913
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.913
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.913
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.913
29842.m003704 Ricinus communis 29842.m003704 N 0.913
mgf008488m Mimulus guttatus mgf008488m N 0.913
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.913
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.913
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.913
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.913
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.913
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.913
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.913
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.913
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.913
Ca_00214 Cicer arietinum Ca_00214 N 0.913
F775_12027 Aegilops tauschii F775_12027 N 0.913
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.913
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.913
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.913
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.913
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.913
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.913
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.913
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.913
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.913
OB04G33270 Oryza brachyantha OB04G33270 N 0.913
OB05G29420 Oryza brachyantha OB05G29420 N 0.913
OBART05G21860 Oryza barthii OBART05G21860 N 0.913
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.913
OBART04G24870 Oryza barthii OBART04G24870 N 0.913
OBART01G33360 Oryza barthii OBART01G33360 N 0.913
OB08G14900 Oryza brachyantha OB08G14900 N 0.913
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.913
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.913
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.913
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.913
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.913
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.913
PK14284.1 Cannabis sativa PK14284.1 N 0.913
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.913
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.913
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.913
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.913
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.913
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.913
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.913
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.913
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.913
OS04G0631600 Oryza sativa OS04G0631600 N 0.913
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.913
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.913
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.913
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.913
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.913
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.913
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.913
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.913
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.913
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.913
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.913
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.913
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.913
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.913
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.913
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.913
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.913
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.913
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.913
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.913
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.913
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.913
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.913
Cucsa.125970 Cucumis sativus Cucsa.125970 N 0.910
Bra035761 Brassica rapa Bra035761 N 0.902
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.901
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.893
SapurV1A.2213s0020 Salix purpurea SapurV1A.2213s0020 N 0.890
SapurV1A.0658s0070 Salix purpurea SapurV1A.0658s0070 N 0.890
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.889
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.889
MDP0000262020 Malus domestica MDP0000262020 N 0.889
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.889
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.889
MDP0000168695 Malus domestica MDP0000168695 N 0.889
TCM_034098 Theobroma cacao TCM_034098 N 0.889
Ca_04928 Cicer arietinum Ca_04928 N 0.889
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.889
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.889
MDP0000687814 Malus domestica MDP0000687814 N 0.889
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.889
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.889
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.889
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.889
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.889
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.889
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.889
BHLH110 Arabidopsis thaliana AT1G27660 N 0.889
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.889
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.889
Cla021101 Citrullus lanatus Cla021101 N 0.889
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.889
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.889
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.889
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.889
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.889
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.889
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.889
30170.m014085 Ricinus communis 30170.m014085 N 0.889
Pm005865 Prunus mume Pm005865 N 0.889
mgf013138m Mimulus guttatus mgf013138m N 0.889
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.889
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.889
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.889
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.889
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.887
TCM_019871 Theobroma cacao TCM_019871 N 0.882
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.882
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.882
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.882
28405.m000015 Ricinus communis 28405.m000015 N 0.882
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.882
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.882
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.882
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.882
Pm007388 Prunus mume Pm007388 N 0.882
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.878
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.878
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.878
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.878
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.878
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.878
Carubv10020420m.g Capsella rubella Carubv10020420m.g N 0.875
Bra031413 Brassica rapa Bra031413 N 0.875
Thhalv10023487m.g Eutrema salsugineum Thhalv10023487m.g N 0.875
BHLH112 Arabidopsis thaliana AT1G61660 N 0.875
Cagra.2507s0001 Capsella grandiflora Cagra.2507s0001 N 0.875
Bo9g041010 Brassica oleracea Bo9g041010 N 0.875
Bo1g098400 Brassica oleracea Bo1g098400 N 0.875
Bra027080 Brassica rapa Bra027080 N 0.875
Bostr.10040s0018 Boechera stricta Bostr.10040s0018 N 0.875
fgenesh2_kg.2__291__AT1G61660.1 Arabidopsis lyrata fgenesh2_kg.2__291__AT1G61660.1 N 0.875
Bo1g024090 Brassica oleracea Bo1g024090 N 0.868
BHLH103 Arabidopsis thaliana AT4G21340 N 0.868
Bra013520 Brassica rapa Bra013520 N 0.868
Bostr.10689s0083 Boechera stricta Bostr.10689s0083 N 0.868
Bra029562 Brassica rapa Bra029562 N 0.866
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.866
Bo9g076250 Brassica oleracea Bo9g076250 N 0.866
Bra023939 Brassica rapa Bra023939 N 0.861
Bo1g108770 Brassica oleracea Bo1g108770 N 0.861
Bo1g108780 Brassica oleracea Bo1g108780 N 0.861
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.858
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N 0.858
cassava33658.m1 Manihot esculenta cassava33658.m1 N 0.858
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.858
Cla011068 Citrullus lanatus Cla011068 N 0.857
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.857
Cagra.1062s0002 Capsella grandiflora Cagra.1062s0002 N 0.857
Carubv10006994m.g Capsella rubella Carubv10006994m.g N 0.857