CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG401028788
(
Solanum tuberosum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
PGSC0003DMG401028788
T043532_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.884
0.958
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.877
0.854
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400074074
bHLH
338
385
AKNLMAERRRRKKLNDRLYMLRSVVPRISKMDRASILGDAIEYLKELL
PGSC0003DMT400074075
bHLH
338
385
AKNLMAERRRRKKLNDRLYMLRSVVPRISKMDRASILGDAIEYLKELL
PGSC0003DMT400074076
bHLH
338
374
AKNLMAERRRRKKLNDRLYMLRSVVPRISKVTNCLHQ
Links
Other
bHLH
family TFs
Other
Solanum tuberosum
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy